Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.65□□□□□ -1.67
TRIM13O60858 HSFY6P-201ENST00000445573 403 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM13O60858 GSTA11P-201ENST00000452866 669 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 AC099560.2-201ENST00000457554 255 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 RNU7-180P-201ENST00000459240 63 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 AL049714.1-201ENST00000466686 347 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 RN7SL41P-201ENST00000476144 297 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 RPL7P43-201ENST00000478876 753 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 AC092451.1-201ENST00000480211 153 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 UBA52P7-201ENST00000486088 380 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 RN7SL214P-201ENST00000487317 265 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM13O60858 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM13O60858 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM13O60858 RNU2-53P-201ENST00000516257 147 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 AC103843.2-201ENST00000530523 682 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM13O60858 AC092490.3-201ENST00000545370 572 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM13O60858 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.65□□□□□ -1.67
TRIM13O60858 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM13O60858 MIR5699-201ENST00000578903 90 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 NF1P5-201ENST00000588287 448 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 AC004805.2-201ENST00000605382 482 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM13O60858 AC009229.4-201ENST00000623854 1947 ntBASIC4.65□□□□□ -1.67
TRIM13O60858 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM13O60858 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM13O60858 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM13O60858 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TRIM13O60858 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM13O60858 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
TRIM13O60858 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM13O60858 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM13O60858 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM13O60858 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TRIM13O60858 RN7SKP104-201ENST00000362605 328 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 RNU6-1252P-201ENST00000363054 104 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 RNU6-266P-201ENST00000364225 107 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 Y_RNA.378-201ENST00000365652 113 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM13O60858 SNORA75B-201ENST00000384053 137 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 RNU6-890P-201ENST00000384121 107 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 Y_RNA.496-201ENST00000384444 101 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM13O60858 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM13O60858 AC114755.2-201ENST00000413520 361 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 GJA6P-201ENST00000415117 1042 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 AC005019.1-201ENST00000436455 431 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM13O60858 RPL36AP15-201ENST00000444514 266 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM13O60858 RPL35AP28-201ENST00000459730 331 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 RN7SL172P-201ENST00000460535 303 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 AC008571.1-201ENST00000467232 300 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 AC108022.1-201ENST00000493466 478 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 AC092436.1-201ENST00000506450 503 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 AC079140.5-201ENST00000507882 310 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM13O60858 Y_RNA.680-201ENST00000516441 93 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 RNU6-1038P-201ENST00000516516 104 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 AC109635.4-202ENST00000531666 412 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM13O60858 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM13O60858 RN7SL802P-201ENST00000577858 299 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 MIR3146-201ENST00000580367 79 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 MIR3672-201ENST00000584290 82 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM13O60858 AC022726.1-201ENST00000587475 207 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 HMGB2P1-201ENST00000591146 634 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM13O60858 AC093799.2-201ENST00000610062 578 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 AC116447.1-201ENST00000613153 453 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 U6.101-201ENST00000637707 76 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 AC008013.2-202ENST00000637965 364 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM13O60858 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM13O60858 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM13O60858 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
TRIM13O60858 KPNA2P1-201ENST00000458289 1591 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 ZFRP1-201ENST00000457579 2970 ntBASIC4.64□□□□□ -1.67
TRIM13O60858 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM13O60858 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
TRIM13O60858 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
TRIM13O60858 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
TRIM13O60858 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM13O60858 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM13O60858 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM13O60858 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM13O60858 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM13O60858 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM13O60858 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM13O60858 MAPK10-349ENST00000641767 3661 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 AL445437.1-201ENST00000623157 3087 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM13O60858 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM13O60858 AL031119.1-201ENST00000404707 1879 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM13O60858 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms