Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AL590704.1-201ENST00000402856 794 ntBASIC5.69□□□□□ -1.5
GFRA3O60609 U3.35-201ENST00000408405 208 ntBASIC5.69□□□□□ -1.5
GFRA3O60609 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.69□□□□□ -1.5
GFRA3O60609 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC5.69□□□□□ -1.5
GFRA3O60609 AL450023.1-201ENST00000450868 751 ntBASIC5.69□□□□□ -1.5
GFRA3O60609 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.69□□□□□ -1.5
GFRA3O60609 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC5.69□□□□□ -1.5
GFRA3O60609 RPL21P41-201ENST00000459863 264 ntBASIC5.69□□□□□ -1.5
GFRA3O60609 AC104164.1-201ENST00000460282 590 ntBASIC5.69□□□□□ -1.5
GFRA3O60609 RN7SL447P-201ENST00000494711 245 ntBASIC5.69□□□□□ -1.5
GFRA3O60609 MTND3P25-201ENST00000509243 135 ntBASIC5.69□□□□□ -1.5
GFRA3O60609 Y_RNA.706-201ENST00000516933 99 ntBASIC5.69□□□□□ -1.5
GFRA3O60609 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.69□□□□□ -1.5
GFRA3O60609 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.69□□□□□ -1.5
GFRA3O60609 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.69□□□□□ -1.5
GFRA3O60609 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.69□□□□□ -1.5
GFRA3O60609 HSPE1P4-201ENST00000550617 308 ntBASIC5.69□□□□□ -1.5
GFRA3O60609 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.69□□□□□ -1.5
GFRA3O60609 AC022884.3-201ENST00000579571 248 ntBASIC5.69□□□□□ -1.5
GFRA3O60609 KLKP1-201ENST00000595979 403 ntBASIC5.69□□□□□ -1.5
GFRA3O60609 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.69□□□□□ -1.5
GFRA3O60609 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA3O60609 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA3O60609 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.69□□□□□ -1.5
GFRA3O60609 LCOR-201ENST00000286067 4542 ntBASIC5.69□□□□□ -1.5
GFRA3O60609 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
GFRA3O60609 MAPK10-344ENST00000641718 3746 ntBASIC5.69□□□□□ -1.5
GFRA3O60609 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.69□□□□□ -1.5
GFRA3O60609 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA3O60609 SALL4P7-201ENST00000555779 3120 ntBASIC5.69□□□□□ -1.5
GFRA3O60609 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.69□□□□□ -1.5
GFRA3O60609 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA3O60609 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.69□□□□□ -1.5
GFRA3O60609 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA3O60609 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA3O60609 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GFRA3O60609 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA3O60609 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.68□□□□□ -1.5
GFRA3O60609 GTF2IP4-201ENST00000453092 2054 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 AC139769.1-204ENST00000472297 1931 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 KCNMB3P1-202ENST00000493696 3389 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
GFRA3O60609 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA3O60609 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA3O60609 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.68□□□□□ -1.5
GFRA3O60609 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA3O60609 RNY1P11-201ENST00000363759 113 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 RNU6-1164P-201ENST00000364428 107 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 RNA5SP478-201ENST00000364657 115 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 RNA5SP479-201ENST00000364858 117 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 RNU1-43P-201ENST00000365052 165 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA3O60609 RNU6-701P-201ENST00000384059 107 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 RNU6-318P-201ENST00000384283 103 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 AC063979.1-201ENST00000415539 377 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 RPL21P90-201ENST00000415692 466 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 POLR2KP2-201ENST00000438155 177 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 Z92846.1-201ENST00000456203 268 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 RPL32P33-201ENST00000487023 394 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.68□□□□□ -1.5
GFRA3O60609 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.68□□□□□ -1.5
GFRA3O60609 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.68□□□□□ -1.5
GFRA3O60609 BNIP3P5-201ENST00000562290 498 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.68□□□□□ -1.5
GFRA3O60609 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
GFRA3O60609 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA3O60609 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
GFRA3O60609 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA3O60609 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
GFRA3O60609 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA3O60609 AL592148.3-201ENST00000608771 2646 ntBASIC5.68□□□□□ -1.5
GFRA3O60609 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA3O60609 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC5.68□□□□□ -1.5
GFRA3O60609 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA3O60609 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA3O60609 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GFRA3O60609 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.68□□□□□ -1.5
GFRA3O60609 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 AC010624.4-201ENST00000597606 1351 ntBASIC5.67□□□□□ -1.5
GFRA3O60609 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
GFRA3O60609 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.67□□□□□ -1.5
GFRA3O60609 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
GFRA3O60609 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 FTLP6-201ENST00000355274 422 ntBASIC5.67□□□□□ -1.5
GFRA3O60609 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 AC068538.1-201ENST00000376856 336 ntBASIC5.67□□□□□ -1.5
GFRA3O60609 RNU6-578P-201ENST00000390980 103 ntBASIC5.67□□□□□ -1.5
GFRA3O60609 U3.22-201ENST00000391120 215 ntBASIC5.67□□□□□ -1.5
GFRA3O60609 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
GFRA3O60609 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.67□□□□□ -1.5
GFRA3O60609 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.67□□□□□ -1.5
GFRA3O60609 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.67□□□□□ -1.5
GFRA3O60609 AL353748.1-201ENST00000440753 474 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms