Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MUPP-201ENST00000438111 566 ntBASIC2.81□□□□□ -1.96
CHMP2AO43633 AC004866.2-201ENST00000438285 481 ntBASIC2.81□□□□□ -1.96
CHMP2AO43633 RPL7P55-201ENST00000450522 746 ntBASIC2.81□□□□□ -1.96
CHMP2AO43633 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.81□□□□□ -1.96
CHMP2AO43633 AC084024.2-201ENST00000503480 791 ntBASIC2.81□□□□□ -1.96
CHMP2AO43633 AC009901.1-201ENST00000506703 541 ntBASIC2.81□□□□□ -1.96
CHMP2AO43633 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.81□□□□□ -1.96
CHMP2AO43633 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.81□□□□□ -1.96
CHMP2AO43633 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.81□□□□□ -1.96
CHMP2AO43633 RNA5SP76-201ENST00000516277 87 ntBASIC2.81□□□□□ -1.96
CHMP2AO43633 AC087373.1-201ENST00000524920 491 ntBASIC2.81□□□□□ -1.96
CHMP2AO43633 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CHMP2AO43633 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CHMP2AO43633 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.81□□□□□ -1.96
CHMP2AO43633 AC008739.2-201ENST00000597006 317 ntBASIC2.81□□□□□ -1.96
CHMP2AO43633 AC010738.1-201ENST00000604970 987 ntBASIC2.81□□□□□ -1.96
CHMP2AO43633 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.81□□□□□ -1.96
CHMP2AO43633 BX664608.1-201ENST00000610519 487 ntBASIC2.81□□□□□ -1.96
CHMP2AO43633 MIR8084-201ENST00000614105 89 ntBASIC2.81□□□□□ -1.96
CHMP2AO43633 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.81□□□□□ -1.96
CHMP2AO43633 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.81□□□□□ -1.96
CHMP2AO43633 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.81□□□□□ -1.96
CHMP2AO43633 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.81□□□□□ -1.96
CHMP2AO43633 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.81□□□□□ -1.96
CHMP2AO43633 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CHMP2AO43633 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CHMP2AO43633 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.8□□□□□ -1.96
CHMP2AO43633 RNU1-100P-201ENST00000365255 165 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.8□□□□□ -1.96
CHMP2AO43633 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CHMP2AO43633 AL024474.1-201ENST00000404655 591 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 AL133384.1-201ENST00000412744 351 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 AC019070.1-201ENST00000415008 1024 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 AL356320.2-201ENST00000417263 507 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 EZH2P1-201ENST00000431167 291 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 FCF1P1-201ENST00000432690 571 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 AC092573.2-201ENST00000434546 243 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.8□□□□□ -1.96
CHMP2AO43633 RPL39P40-201ENST00000445481 146 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 AL513328.1-201ENST00000446460 224 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 AL096803.2-201ENST00000450032 677 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.8□□□□□ -1.96
CHMP2AO43633 RPL23AP45-201ENST00000476406 468 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.8□□□□□ -1.96
CHMP2AO43633 OR8K2P-201ENST00000524645 927 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 AP001646.1-201ENST00000527936 915 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 ELOCP31-201ENST00000540463 467 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 OR7K1P-201ENST00000546439 926 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 AC090695.1-201ENST00000561269 1222 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 RPL23AP84-201ENST00000571193 464 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 AC133794.1-201ENST00000602731 914 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 AC012443.1-201ENST00000605605 231 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 U4.3-201ENST00000621047 82 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 AC002064.3-201ENST00000623448 346 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 AC110079.1-202ENST00000635213 138 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 MIR6733-201ENST00000635723 61 ntBASIC2.8□□□□□ -1.96
CHMP2AO43633 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
CHMP2AO43633 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CHMP2AO43633 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CHMP2AO43633 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CHMP2AO43633 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.79□□□□□ -1.96
CHMP2AO43633 AC092447.7-201ENST00000422212 1621 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CHMP2AO43633 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CHMP2AO43633 SNORD56.5-201ENST00000364281 72 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 OR1L1-202ENST00000373686 1083 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 RNU1-109P-201ENST00000383960 147 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 SNORA51.6-201ENST00000384151 125 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 AC016769.3-201ENST00000396562 315 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 FCF1P2-201ENST00000415284 583 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 RPL17P35-201ENST00000432217 549 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 NDUFB4P6-201ENST00000436819 366 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 HSFY3P-201ENST00000444242 1191 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.79□□□□□ -1.96
CHMP2AO43633 PNPLA4P1-201ENST00000458328 305 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 snoU109.4-201ENST00000458953 143 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 SETP11-201ENST00000473027 690 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 RPL21P131-201ENST00000497298 483 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.79□□□□□ -1.96
CHMP2AO43633 AC048346.1-201ENST00000510247 144 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 AC118465.1-201ENST00000513820 1271 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.79□□□□□ -1.96
CHMP2AO43633 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.79□□□□□ -1.96
CHMP2AO43633 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.79□□□□□ -1.96
CHMP2AO43633 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.79□□□□□ -1.96
CHMP2AO43633 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.79□□□□□ -1.96
CHMP2AO43633 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.79□□□□□ -1.96
CHMP2AO43633 DNAJC19P3-201ENST00000594491 331 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.79□□□□□ -1.96
CHMP2AO43633 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CHMP2AO43633 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.79□□□□□ -1.96
CHMP2AO43633 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CHMP2AO43633 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CHMP2AO43633 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CHMP2AO43633 XGY1-201ENST00000381172 446 ntBASIC2.78□□□□□ -1.96
CHMP2AO43633 AL356057.2-201ENST00000403318 432 ntBASIC2.78□□□□□ -1.96
CHMP2AO43633 AL162578.1-201ENST00000406202 378 ntBASIC2.78□□□□□ -1.96
CHMP2AO43633 AL139098.1-201ENST00000407291 389 ntBASIC2.78□□□□□ -1.96
CHMP2AO43633 BX664727.1-201ENST00000416024 466 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms