Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 DDX43P2-201ENST00000604753 1354 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 Y_RNA.111-201ENST00000363248 100 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 AP002088.1-201ENST00000382740 395 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 SNORA48.8-201ENST00000391324 134 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 RNA5SP31-201ENST00000411144 127 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 EI24P1-201ENST00000416584 867 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 ZYG11AP1-201ENST00000430329 837 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 AC022018.1-201ENST00000430685 241 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 MUPP-201ENST00000438111 566 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 HSPE1P28-201ENST00000443139 211 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 MTND2P19-201ENST00000449129 1012 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 HMGN1P18-201ENST00000457642 277 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 AC022861.1-201ENST00000522981 663 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 MTCYBP41-201ENST00000528913 1123 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 H3F3AP1-201ENST00000559984 334 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 AC087481.2-201ENST00000565492 330 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 AL031281.1-201ENST00000604049 488 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 AC093732.2-201ENST00000607950 274 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 AC007490.1-201ENST00000624321 703 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 SCARNA15.3-201ENST00000626315 122 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 SCARNA4.1-201ENST00000628597 123 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 AL022578.1-201ENST00000439330 1433 ntBASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NEDD8-MDP1E9PL57 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AL391994.1-201ENST00000254724 282 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 MIR22-201ENST00000362190 85 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 SNORA4.1-201ENST00000364263 144 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 RNU6-712P-201ENST00000410558 100 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 BX679664.1-201ENST00000434429 253 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 MTCYBP45-201ENST00000435243 565 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 YWHAZP7-201ENST00000436906 631 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AL353691.1-201ENST00000451332 387 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AC005921.1-201ENST00000510589 286 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AC010625.1-201ENST00000511296 403 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 RNU6-150P-201ENST00000516237 95 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 RN7SKP289-201ENST00000517244 295 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 ZNF321P-202ENST00000550843 495 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AC090888.2-201ENST00000559765 1144 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AL596327.1-201ENST00000603629 213 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AL390208.1-201ENST00000605885 644 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AL445264.1-201ENST00000621719 171 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AL137790.1-201ENST00000634283 177 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 MAPK10-362ENST00000641864 4484 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 AL049780.3-201ENST00000624612 1583 ntBASIC3.17□□□□□ -1.9
NEDD8-MDP1E9PL57 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 SNORA31-201ENST00000362607 130 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AL031679.1-201ENST00000400616 525 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 RN7SKP220-201ENST00000410611 288 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AC005005.2-201ENST00000420779 380 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 MTCO2P5-201ENST00000422621 426 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 RPL23AP22-201ENST00000437556 453 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AL008629.1-201ENST00000438615 184 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 MTND5P14-201ENST00000441481 1267 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AC025750.2-201ENST00000442609 450 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AL109741.2-201ENST00000455561 343 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms