Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.72□□□□□ -1.81
LRRC53A6NM62 RAC1P7-201ENST00000445367 377 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 AL360221.1-201ENST00000445989 335 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 AC239367.2-201ENST00000447309 705 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 AL590365.1-201ENST00000450788 243 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 AC006539.3-201ENST00000454258 129 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.72□□□□□ -1.81
LRRC53A6NM62 CENPBD1P1-201ENST00000464061 469 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 RPL7P23-201ENST00000493874 747 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 AC093278.1-201ENST00000494700 600 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 KLHL2P1-201ENST00000508691 521 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 NDUFB4P9-201ENST00000511646 388 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 AC107934.2-201ENST00000518653 310 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 AC007115.1-201ENST00000546853 234 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 SETP2-201ENST00000553886 926 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 ZNF519P3-201ENST00000557158 1032 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.72□□□□□ -1.81
LRRC53A6NM62 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.72□□□□□ -1.81
LRRC53A6NM62 NBR2-204ENST00000587322 63 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.72□□□□□ -1.81
LRRC53A6NM62 AC119751.7-201ENST00000600494 245 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 AC073544.2-201ENST00000601155 540 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.72□□□□□ -1.81
LRRC53A6NM62 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.72□□□□□ -1.81
LRRC53A6NM62 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.72□□□□□ -1.81
LRRC53A6NM62 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LRRC53A6NM62 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LRRC53A6NM62 AC010733.2-201ENST00000589496 5702 ntBASIC3.72□□□□□ -1.81
LRRC53A6NM62 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LRRC53A6NM62 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.72□□□□□ -1.81
LRRC53A6NM62 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.81
LRRC53A6NM62 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.71□□□□□ -1.81
LRRC53A6NM62 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRRC53A6NM62 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRRC53A6NM62 AC021755.1-201ENST00000559747 1447 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 MTCO1P9-201ENST00000505577 1534 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRRC53A6NM62 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRRC53A6NM62 RNY4P24-201ENST00000362735 96 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 SNORA51.2-201ENST00000364595 132 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 RNA5SP31-201ENST00000411144 127 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 Y_RNA.625-201ENST00000411256 107 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 Z99755.1-201ENST00000414048 380 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 AC016907.1-201ENST00000419483 435 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.71□□□□□ -1.82
LRRC53A6NM62 MTCO1P39-201ENST00000426148 480 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 RPL21P66-201ENST00000426566 466 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.71□□□□□ -1.82
LRRC53A6NM62 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.71□□□□□ -1.82
LRRC53A6NM62 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.71□□□□□ -1.82
LRRC53A6NM62 AC234775.1-201ENST00000454247 670 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 U3.44-201ENST00000458938 192 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.71□□□□□ -1.82
LRRC53A6NM62 HMGN1P11-201ENST00000508668 303 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 FABP5P5-201ENST00000515537 406 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 AC103783.1-201ENST00000520506 373 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.71□□□□□ -1.82
LRRC53A6NM62 FAM60BP-201ENST00000578364 658 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.71□□□□□ -1.82
LRRC53A6NM62 AC006116.10-201ENST00000591836 581 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 AP001429.1-201ENST00000602568 530 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 AL355472.4-201ENST00000610233 626 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 AC025594.3-201ENST00000613068 790 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.71□□□□□ -1.82
LRRC53A6NM62 AC112204.3-201ENST00000623822 332 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.71□□□□□ -1.82
LRRC53A6NM62 AC048347.1-201ENST00000624621 427 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 AC068724.3-201ENST00000625906 87 ntBASIC3.71□□□□□ -1.82
LRRC53A6NM62 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRRC53A6NM62 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRRC53A6NM62 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.71□□□□□ -1.82
LRRC53A6NM62 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRRC53A6NM62 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LRRC53A6NM62 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
LRRC53A6NM62 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LRRC53A6NM62 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 RNU1-75P-201ENST00000347264 129 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LRRC53A6NM62 Y_RNA.51-201ENST00000362725 102 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 RNU2-43P-201ENST00000410306 190 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 CCDC58P2-201ENST00000417131 366 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 DUTP6-201ENST00000425573 462 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 NOTCH2P1-201ENST00000443481 624 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 USP9YP12-201ENST00000450481 570 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LRRC53A6NM62 AL136097.1-201ENST00000456945 913 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 AC112204.1-201ENST00000502591 103 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 MTCO3P28-201ENST00000513351 515 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms