Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RNU6-143P-201ENST00000516942 93 ntBASIC6.12□□□□□ -1.43
RCCD1A6NED2 RNU6-1315P-201ENST00000517187 99 ntBASIC6.12□□□□□ -1.43
RCCD1A6NED2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RCCD1A6NED2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC6.12□□□□□ -1.43
RCCD1A6NED2 AC037487.3-201ENST00000606668 112 ntBASIC6.12□□□□□ -1.43
RCCD1A6NED2 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.12□□□□□ -1.43
RCCD1A6NED2 uc_338.29-201ENST00000615099 168 ntBASIC6.12□□□□□ -1.43
RCCD1A6NED2 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RCCD1A6NED2 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.12□□□□□ -1.43
RCCD1A6NED2 AL078621.3-201ENST00000623707 2042 ntBASIC6.12□□□□□ -1.43
RCCD1A6NED2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC6.12□□□□□ -1.43
RCCD1A6NED2 AP001029.2-203ENST00000589795 4910 ntBASIC6.12□□□□□ -1.43
RCCD1A6NED2 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.12□□□□□ -1.43
RCCD1A6NED2 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.12□□□□□ -1.43
RCCD1A6NED2 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.12□□□□□ -1.43
RCCD1A6NED2 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RCCD1A6NED2 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RCCD1A6NED2 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
RCCD1A6NED2 AP005435.3-201ENST00000531260 3198 ntBASIC6.12□□□□□ -1.43
RCCD1A6NED2 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
RCCD1A6NED2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RCCD1A6NED2 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RCCD1A6NED2 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
RCCD1A6NED2 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RCCD1A6NED2 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
RCCD1A6NED2 Y_RNA.233-201ENST00000364407 101 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 RNU6-326P-201ENST00000365480 107 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RCCD1A6NED2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RCCD1A6NED2 Y_RNA.383-201ENST00000383855 97 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 SNORD63-201ENST00000384262 68 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 MIR130B-202ENST00000385018 82 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 MIR301A-201ENST00000385261 86 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 SNORA11.5-201ENST00000408163 128 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 AC008065.1-201ENST00000428525 348 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 AL592045.1-201ENST00000429867 352 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 AC093414.1-201ENST00000434712 514 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 AL163193.1-201ENST00000444895 788 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC6.11□□□□□ -1.43
RCCD1A6NED2 GEMIN2P1-201ENST00000454246 752 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.11□□□□□ -1.43
RCCD1A6NED2 RNU1-88P-201ENST00000459274 128 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC6.11□□□□□ -1.43
RCCD1A6NED2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC6.11□□□□□ -1.43
RCCD1A6NED2 ANXA2P1-201ENST00000505539 926 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 APOOP4-201ENST00000513530 597 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 GMPSP1-201ENST00000514075 579 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 SNORD116-28-201ENST00000516123 91 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 RN7SKP35-201ENST00000517210 151 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 RAB9BP1-201ENST00000519581 626 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.11□□□□□ -1.43
RCCD1A6NED2 RPL21P7-201ENST00000557463 483 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 MIR4659A-201ENST00000580269 81 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 RPL23AP78-201ENST00000599928 470 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 MIR7109-201ENST00000613748 65 ntBASIC6.11□□□□□ -1.43
RCCD1A6NED2 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.11□□□□□ -1.43
RCCD1A6NED2 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RCCD1A6NED2 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RCCD1A6NED2 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RCCD1A6NED2 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.11□□□□□ -1.43
RCCD1A6NED2 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
RCCD1A6NED2 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RCCD1A6NED2 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
RCCD1A6NED2 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
RCCD1A6NED2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC6.11□□□□□ -1.43
RCCD1A6NED2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RCCD1A6NED2 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.1□□□□□ -1.43
RCCD1A6NED2 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.1□□□□□ -1.43
RCCD1A6NED2 AP002512.4-202ENST00000641599 4530 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 AC093671.1-201ENST00000624981 2929 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.1□□□□□ -1.43
RCCD1A6NED2 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.1□□□□□ -1.43
RCCD1A6NED2 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RCCD1A6NED2 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RCCD1A6NED2 MIR133A2-201ENST00000347538 102 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 RN7SKP187-201ENST00000365536 330 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 RNU6-395P-201ENST00000365662 106 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 SNORA70.6-201ENST00000383934 134 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 RNU1-74P-201ENST00000384108 171 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 RNU6-1035P-201ENST00000384477 107 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 Y_RNA.504-201ENST00000384481 104 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RCCD1A6NED2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RCCD1A6NED2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC6.1□□□□□ -1.43
RCCD1A6NED2 AC108479.1-201ENST00000431142 427 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 MTCO1P5-201ENST00000433573 344 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC6.1□□□□□ -1.43
RCCD1A6NED2 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.1□□□□□ -1.43
RCCD1A6NED2 PPIAP21-201ENST00000464473 501 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 AC087477.1-201ENST00000465747 340 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 RNU6-479P-201ENST00000516348 105 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 IGKV3D-25-201ENST00000519599 235 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.1□□□□□ -1.43
RCCD1A6NED2 MRPS18CP4-201ENST00000535821 231 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC6.1□□□□□ -1.43
RCCD1A6NED2 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.1□□□□□ -1.43
RCCD1A6NED2 AC107958.1-201ENST00000556576 290 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 AC096996.1-201ENST00000563813 325 ntBASIC6.1□□□□□ -1.43
RCCD1A6NED2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC6.1□□□□□ -1.43
RCCD1A6NED2 MIR3154-201ENST00000577829 84 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms