Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 RPL7P26-201ENST00000333817 754 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 HSPE1P11-201ENST00000339579 310 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 Y_RNA.22-201ENST00000362492 102 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 RN7SKP44-201ENST00000363602 316 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 Y_RNA.255-201ENST00000364581 97 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC66A2RUB6 RNU6-767P-201ENST00000384132 107 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 RNU1-44P-201ENST00000384453 163 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 MIR558-201ENST00000384920 94 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC66A2RUB6 BX510359.2-201ENST00000417920 305 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC66A2RUB6 OR4K11P-201ENST00000431829 904 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 RPL36AP53-201ENST00000432891 316 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC66A2RUB6 AC016831.4-201ENST00000438302 307 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 HMGB1P25-201ENST00000468402 607 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 AC068305.1-201ENST00000497406 726 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC66A2RUB6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC66A2RUB6 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC66A2RUB6 AC114797.1-201ENST00000514003 728 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 RN7SKP116-201ENST00000516902 319 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC66A2RUB6 AL161713.1-201ENST00000555538 145 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC66A2RUB6 AC068831.4-201ENST00000556118 109 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 OR4K8P-201ENST00000578842 1048 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 MIR4458-201ENST00000578872 75 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 AL031320.1-201ENST00000604177 357 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 RN7SL722P-201ENST00000617780 284 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 RN7SL565P-201ENST00000618246 284 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 AL136221.1-201ENST00000621449 509 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 AL161637.1-201ENST00000622380 412 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 U3.53-201ENST00000628922 216 ntBASIC4.78□□□□□ -1.64
CCDC66A2RUB6 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CCDC66A2RUB6 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC66A2RUB6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC66A2RUB6 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC66A2RUB6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 NACAP2-201ENST00000318548 624 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 RNA5SP388-201ENST00000362584 119 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 RNU6-511P-201ENST00000363496 107 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 RNU4-76P-201ENST00000364509 141 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 RNU6-996P-201ENST00000365438 107 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 RNU1-63P-201ENST00000383902 164 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 SNORA70E-201ENST00000384492 135 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AL136116.1-201ENST00000403591 381 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 RNU2-47P-201ENST00000410649 186 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 RN7SKP100-201ENST00000411258 284 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 OR1AA1P-201ENST00000419597 916 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AC005517.2-201ENST00000424673 553 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 MED13P1-201ENST00000428342 171 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AL049745.1-201ENST00000433953 286 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 S100A11P1-201ENST00000477525 312 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AL163973.1-201ENST00000484753 577 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 RPS3AP50-201ENST00000487064 803 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AC020593.1-201ENST00000507399 299 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 RN7SKP276-201ENST00000516242 268 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 RNU2-10P-201ENST00000516375 211 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AL138976.2-201ENST00000563989 694 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AL669831.4-202ENST00000590817 238 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AC010201.1-201ENST00000605051 540 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AL034351.1-201ENST00000605288 668 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AC128687.2-201ENST00000609657 566 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AC105429.2-201ENST00000610567 517 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AL121757.2-201ENST00000611223 313 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC66A2RUB6 RIOK3P1-201ENST00000418778 1528 ntBASIC4.77□□□□□ -1.65
CCDC66A2RUB6 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.76□□□□□ -1.65
CCDC66A2RUB6 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms