Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MTND4P31-201ENST00000425607 1343 ntBASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 RN7SKP32-201ENST00000410167 303 ntBASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 AL356379.1-201ENST00000414105 126 ntBASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 AL356320.2-201ENST00000417263 507 ntBASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 RPL7P30-201ENST00000420888 709 ntBASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 MTCYBP34-201ENST00000439552 670 ntBASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 AL513321.1-201ENST00000441175 761 ntBASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 USP9YP15-201ENST00000442391 422 ntBASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 AC107393.1-201ENST00000512403 346 ntBASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 AC007375.1-201ENST00000554513 578 ntBASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 AGGF1P5-201ENST00000567900 919 ntBASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 MTCO1P40-201ENST00000574371 625 ntBASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 MIR3618-201ENST00000580330 88 ntBASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 AC026790.2-201ENST00000606282 430 ntBASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
TCRBV3S1A0A5B6 SNORA46.1-201ENST00000391069 153 ntBASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AL357078.2-201ENST00000416486 427 ntBASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 HMGB1P48-201ENST00000446155 598 ntBASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 SNRPGP6-201ENST00000451124 220 ntBASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AC097493.1-201ENST00000463958 372 ntBASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 RN7SKP31-201ENST00000516354 278 ntBASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AC009063.1-201ENST00000563342 702 ntBASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AC009097.3-201ENST00000563557 1018 ntBASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AC087481.2-201ENST00000565492 330 ntBASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 MIR3117-201ENST00000584034 78 ntBASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AC008749.1-201ENST00000597650 306 ntBASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AL390838.2-201ENST00000602394 274 ntBASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AP001002.2-201ENST00000625137 386 ntBASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AC009812.4-201ENST00000569134 1805 ntBASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 AC022336.2-201ENST00000568966 2538 ntBASIC1.68□□□□□ -2.14
TCRBV3S1A0A5B6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 RNU6-837P-201ENST00000391056 108 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AL445529.1-201ENST00000398713 389 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 NPM1P11-201ENST00000417106 855 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AL356320.1-201ENST00000429616 163 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 MTCO1P45-201ENST00000431457 267 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AL645638.1-201ENST00000440519 361 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 TPTE2P6-202ENST00000445572 1007 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 PSPHP1-201ENST00000450062 261 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 ATG12P2-201ENST00000456830 416 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 BZW1P2-201ENST00000473537 826 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 RPL21P99-201ENST00000480369 423 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 OR4G11P-201ENST00000492842 939 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AC093281.2-201ENST00000510153 597 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AP000867.2-201ENST00000532468 320 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AC010546.1-201ENST00000569391 485 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AC017100.2-201ENST00000584628 355 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AC010928.2-201ENST00000588017 287 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 RPP40P2-201ENST00000603596 712 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AC135178.6-201ENST00000605314 398 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AL513477.2-201ENST00000607858 568 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 AC116618.1-201ENST00000634617 774 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 MFSD8-245ENST00000641743 948 ntBASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TCRBV3S1A0A5B6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms