Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC007098.1-201ENST00000420122 367 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 TMEM183AP1-205ENST00000432739 290 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 GAPDHP48-201ENST00000436626 961 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 RNU6-1037P-201ENST00000459571 107 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 AC133134.1-201ENST00000466800 359 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 RPL23AP2-201ENST00000471227 466 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 AC113155.1-201ENST00000511141 769 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 SNORA31.22-201ENST00000517204 135 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 AC137627.1-201ENST00000545761 289 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 BNIP3P5-201ENST00000562290 498 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 AC004584.2-201ENST00000570407 410 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 MIR4660-201ENST00000583549 74 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 HMGB2P1-201ENST00000591146 634 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 AC006023.2-201ENST00000609916 167 ntBASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PCDHGA11Q9Y5H2 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 AL159987.1-201ENST00000347911 293 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 RNA5SP52-201ENST00000362448 134 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 RN7SKP275-201ENST00000364626 301 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 Y_RNA.477-201ENST00000384352 108 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 MIR301A-201ENST00000385261 86 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 RNU6-1093P-201ENST00000391194 107 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 CYCSP33-201ENST00000414485 327 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 CKS1BP5-201ENST00000434172 273 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 USP9YP7-201ENST00000436723 430 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 USP9YP32-201ENST00000452432 430 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 MTND4LP30-201ENST00000454092 297 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 RPL32P33-201ENST00000487023 394 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 HMGB1P35-201ENST00000503360 598 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 NDUFB4P9-201ENST00000511646 388 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 RNU6-911P-201ENST00000516523 104 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 AP004609.2-201ENST00000532177 190 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 AL049839.1-201ENST00000556151 657 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 AC107958.1-201ENST00000556576 290 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 SNORD84-203ENST00000584275 78 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 MIR6133-201ENST00000617057 108 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 AC026951.1-201ENST00000559530 2459 ntBASIC5.48□□□□□ -1.53
PCDHGA11Q9Y5H2 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 RN7SKP162-201ENST00000363605 345 ntBASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 AC079809.1-201ENST00000415468 276 ntBASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 AL451062.2-201ENST00000427515 271 ntBASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 AC105399.1-202ENST00000447303 205 ntBASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 FO393415.2-201ENST00000480085 343 ntBASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 RNU6-927P-201ENST00000516199 100 ntBASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 RNU6-897P-201ENST00000517135 105 ntBASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 IGKV2D-23-201ENST00000518179 286 ntBASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 IGLV3-30-201ENST00000524362 298 ntBASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 TOMM20P1-201ENST00000534518 427 ntBASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms