Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 SDHCP2-201ENST00000398565 501 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 RNA5SP146-201ENST00000410743 123 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 RN7SKP263-201ENST00000411194 309 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 SNRPFP1-201ENST00000414761 252 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AL356387.2-201ENST00000422272 243 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AC008850.1-201ENST00000427546 362 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 RPL7L1P10-201ENST00000427790 463 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AL353572.1-201ENST00000442490 417 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AC079168.2-201ENST00000453977 416 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 RPL23AP31-201ENST00000456160 467 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AC025164.1-201ENST00000496249 478 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AC116353.2-201ENST00000505332 712 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AC026427.2-201ENST00000506228 536 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 SNORA40.12-201ENST00000516329 111 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 Y_RNA.704-201ENST00000516851 102 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 SNORA31.22-201ENST00000517204 135 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AC118273.2-201ENST00000532092 465 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AP004242.1-201ENST00000533701 349 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 MIR3921-201ENST00000577308 85 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AC008752.3-201ENST00000588113 712 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AC012409.3-201ENST00000611343 981 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AL355810.1-201ENST00000614629 552 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AC010133.1-201ENST00000615809 842 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 U3.53-201ENST00000628922 216 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 AC138649.5-201ENST00000637456 137 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 MFSD8-242ENST00000641690 4199 ntBASIC4.32□□□□□ -1.72
PCDHGA9Q9Y5G4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 SNORA31-201ENST00000362607 130 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 RNU6-179P-201ENST00000363350 107 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 RNU6-780P-201ENST00000391030 104 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 RPL23AP48-201ENST00000406913 488 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 RN7SKP27-201ENST00000410684 333 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 RPL27AP8-201ENST00000424277 446 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 AL606489.2-201ENST00000433886 234 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 RPL26P6-201ENST00000440913 438 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 MTND4P18-201ENST00000447010 465 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 DPPA3P1-201ENST00000448050 469 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 FDX1P2-201ENST00000450769 375 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 AC079804.1-201ENST00000461922 436 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 RN7SL41P-201ENST00000476144 297 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 RNU6-1073P-201ENST00000517182 106 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 AP000827.1-201ENST00000527814 258 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 AP001646.1-201ENST00000527936 915 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 SNRPGP16-201ENST00000533275 226 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 MIR3939-201ENST00000582614 106 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 AC007998.5-201ENST00000622938 237 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 U6.114-201ENST00000636407 96 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 MAPK10-320ENST00000641462 6696 ntBASIC4.31□□□□□ -1.72
PCDHGA9Q9Y5G4 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AL359922.3-201ENST00000624779 1670 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 RNA5SP388-201ENST00000362584 119 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 RNU5A-1-201ENST00000362698 116 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 RN7SKP44-201ENST00000363602 316 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 RNU6-534P-201ENST00000364877 106 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 RNU6-1158P-201ENST00000391167 107 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 RNA5SP118-201ENST00000410385 109 ntBASIC4.3□□□□□ -1.72
PCDHGA9Q9Y5G4 AMD1P2-201ENST00000412936 992 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms