Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC091903.1-201ENST00000624322 454 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 AC139769.1-204ENST00000472297 1931 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 MIR335-201ENST00000362173 94 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 Y_RNA.84-201ENST00000363011 104 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 Y_RNA.150-201ENST00000363562 102 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 RNU6-280P-201ENST00000364145 104 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 SNORA69.1-201ENST00000390904 137 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 RPL11P3-201ENST00000395256 523 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 RNU6-130P-201ENST00000411112 103 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 AC063979.1-201ENST00000415539 377 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 EIF4EP2-201ENST00000422816 654 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 RPS27AP12-201ENST00000429552 465 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 RPS27P18-201ENST00000431701 247 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 AC004129.2-201ENST00000457229 287 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 RPL23AP2-201ENST00000471227 466 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 RPS17P15-201ENST00000475609 349 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 RPS23P1-201ENST00000491662 432 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 AC026784.1-201ENST00000507986 352 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 AC074255.1-201ENST00000511259 501 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 AC004792.1-201ENST00000614523 137 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 AL731566.2-201ENST00000618971 317 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 MIR6719-201ENST00000622428 87 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 FAM91A3P-201ENST00000456826 2544 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 ZNF299P-201ENST00000406845 1804 ntBASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB11Q9Y5F2 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.52
PCDHB11Q9Y5F2 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.52
PCDHB11Q9Y5F2 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
PCDHB11Q9Y5F2 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCDHB11Q9Y5F2 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.59□□□□□ -1.52
PCDHB11Q9Y5F2 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
PCDHB11Q9Y5F2 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 MAPK10-338ENST00000641647 3362 ntBASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 RNU1-76P-201ENST00000362903 159 ntBASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 RNY1-201ENST00000364228 113 ntBASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 Y_RNA.270-201ENST00000364693 104 ntBASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 RN7SKP124-201ENST00000364730 341 ntBASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 RNU6-746P-201ENST00000384112 109 ntBASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 REREP1Y-201ENST00000422655 198 ntBASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 AL662874.1-201ENST00000426065 230 ntBASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 REREP2Y-201ENST00000439103 200 ntBASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 TPT1P13-201ENST00000449760 499 ntBASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 RPL12P39-201ENST00000455456 496 ntBASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 AL139109.1-201ENST00000455491 297 ntBASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 AC008716.1-201ENST00000511084 513 ntBASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 RNU6-615P-201ENST00000516065 106 ntBASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 AC126177.3-201ENST00000551839 688 ntBASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 AC126615.2-201ENST00000553003 515 ntBASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.58□□□□□ -1.52
PCDHB11Q9Y5F2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms