Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 RNU6-238P-201ENST00000363313 106 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 RNA5SP428-201ENST00000365129 132 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 Y_RNA.473-201ENST00000384333 102 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 MIR765-201ENST00000390226 114 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 Y_RNA.594-201ENST00000410373 140 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 E2F6P2-201ENST00000420708 748 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 RSL24D1P6-201ENST00000426934 401 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 AC116533.1-201ENST00000459748 321 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 RPS20P21-201ENST00000466859 343 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 AC022034.3-201ENST00000471393 478 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 RN7SL177P-201ENST00000476596 299 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 AC104564.1-201ENST00000493028 407 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 AC023424.1-201ENST00000496058 459 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 SCARNA21.2-201ENST00000516600 166 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 RNU6-1069P-201ENST00000516612 133 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 RN7SKP66-201ENST00000516681 231 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 RN7SKP147-201ENST00000517154 244 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 MIR5692C1-201ENST00000585309 91 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 AC008521.1-201ENST00000587471 187 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 AC005357.1-201ENST00000588399 301 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 AC020910.3-201ENST00000603701 874 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 PISRT1.1-201ENST00000616930 107 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 EXOC5P1-201ENST00000510543 1969 ntBASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
AP4E1Q9UPM8 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
AP4E1Q9UPM8 AC009951.1-201ENST00000623674 2614 ntBASIC5.15□□□□□ -1.58
AP4E1Q9UPM8 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
AP4E1Q9UPM8 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
AP4E1Q9UPM8 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.15□□□□□ -1.58
AP4E1Q9UPM8 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
AP4E1Q9UPM8 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
AP4E1Q9UPM8 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
AP4E1Q9UPM8 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
AP4E1Q9UPM8 RNU6-1078P-201ENST00000364522 103 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 Y_RNA.257-201ENST00000364596 102 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 RNU1-115P-201ENST00000365329 160 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 RNU6-1050P-201ENST00000410388 107 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 RNU4-34P-201ENST00000410431 124 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 AL590632.1-201ENST00000424289 371 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 RPL7P37-201ENST00000425095 738 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 Z95327.1-201ENST00000446082 482 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 EEF1A1P1-201ENST00000447052 739 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 AC243772.1-201ENST00000451620 410 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 SUMO1P2-201ENST00000452524 304 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 RPSAP50-201ENST00000481955 852 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 RBBP4P6-201ENST00000508098 202 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 RPL23AP53-201ENST00000521854 457 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 GNAI2P1-201ENST00000541815 315 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 AC104687.2-201ENST00000604442 342 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 AC123768.4-201ENST00000616244 701 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 AC019206.1-201ENST00000621938 425 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 AC109780.1-201ENST00000451768 1344 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 AC005592.1-201ENST00000566527 1640 ntBASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.15□□□□□ -1.59
AP4E1Q9UPM8 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 SMG1P4-204ENST00000523028 4131 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 AC074029.4-201ENST00000624796 1859 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 RNU6-490P-201ENST00000362985 107 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 RNA5SP507-201ENST00000363603 121 ntBASIC5.14□□□□□ -1.59
AP4E1Q9UPM8 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms