Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS4AQ9UN37 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS4AQ9UN37 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS4AQ9UN37 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS4AQ9UN37 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS4AQ9UN37 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 AC106871.1-201ENST00000568324 3102 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 RPS3AP36-201ENST00000398190 775 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 CCNG1P1-201ENST00000406783 885 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 RN7SKP235-201ENST00000410662 305 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 RNU2-8P-201ENST00000410727 190 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 RNU6-195P-201ENST00000411352 109 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 TIMM9P3-201ENST00000428659 274 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 MRPS18BP2-201ENST00000434310 759 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 AC132479.1-201ENST00000449160 144 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 RAD23BP3-201ENST00000454157 1152 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 RPL23AP81-201ENST00000455252 467 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 RPL38P1-201ENST00000460914 211 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 AC023598.1-201ENST00000472521 361 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 AC025554.1-201ENST00000505641 188 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 AC017037.2-201ENST00000513850 890 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 RN7SKP116-201ENST00000516902 319 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 AP003072.2-201ENST00000527756 676 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 MTCYBP41-201ENST00000528913 1123 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 AP003385.6-201ENST00000531603 374 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 AC063950.1-201ENST00000552036 308 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 AC107954.1-201ENST00000565906 727 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 AC053481.4-201ENST00000583164 216 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 LLPHP1-201ENST00000603571 367 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 RNA5SP108-201ENST00000605921 117 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 CR381653.2-201ENST00000624041 768 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 AL157786.1-207ENST00000627771 695 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 FAM35DP-201ENST00000323387 2712 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.01□□□□□ -1.77
VPS4AQ9UN37 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
VPS4AQ9UN37 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4□□□□□ -1.77
VPS4AQ9UN37 AL138713.1-201ENST00000624026 2130 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 MAPK10-253ENST00000641010 4072 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
VPS4AQ9UN37 AL158163.1-201ENST00000603915 1649 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
VPS4AQ9UN37 OR5J1P-201ENST00000313544 939 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4□□□□□ -1.77
VPS4AQ9UN37 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
VPS4AQ9UN37 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4□□□□□ -1.77
VPS4AQ9UN37 CIR1P3-201ENST00000405137 479 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 RN7SKP177-201ENST00000410567 355 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 JKAMPP1-201ENST00000413804 919 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4□□□□□ -1.77
VPS4AQ9UN37 ISCA1P6-201ENST00000427740 390 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS4AQ9UN37 AC104850.1-201ENST00000435940 476 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 UBE2V1P13-201ENST00000436983 439 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4□□□□□ -1.77
VPS4AQ9UN37 PPIAP3-201ENST00000450588 505 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 RPS29P19-201ENST00000479709 171 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 RPL35P6-201ENST00000490024 372 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 AC019235.1-201ENST00000503847 207 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
VPS4AQ9UN37 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4□□□□□ -1.77
VPS4AQ9UN37 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS4AQ9UN37 RNU4-60P-201ENST00000517239 135 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 TRAPPC2P2-201ENST00000517589 409 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 AP000889.1-201ENST00000530968 660 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4□□□□□ -1.77
VPS4AQ9UN37 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4□□□□□ -1.77
VPS4AQ9UN37 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4□□□□□ -1.77
VPS4AQ9UN37 AL360157.1-201ENST00000565962 87 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 AC060771.1-201ENST00000582031 164 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4□□□□□ -1.77
VPS4AQ9UN37 AL451044.1-201ENST00000604867 238 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 AP000860.1-201ENST00000605250 559 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 AC064801.1-201ENST00000612025 407 ntBASIC4□□□□□ -1.77
VPS4AQ9UN37 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms