Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 RN7SL30P-201ENST00000488416 306 ntBASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 ACA59.1-201ENST00000515966 143 ntBASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 RNU6-143P-201ENST00000516942 93 ntBASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 MIR4458-201ENST00000578872 75 ntBASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 IMMP1LP3-201ENST00000604197 224 ntBASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 AC015967.1-201ENST00000619893 476 ntBASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 MIR8062-201ENST00000621515 85 ntBASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 MIR8080-201ENST00000622224 89 ntBASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
FOXD3Q9UJU5 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 MTND5P7-201ENST00000413558 1798 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 Y_RNA.257-201ENST00000364596 102 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 Y_RNA.276-201ENST00000364732 109 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 Y_RNA.307-201ENST00000365022 117 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 Y_RNA.324-201ENST00000365165 102 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 RNA5SP131-201ENST00000365452 119 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 RNU6-1074P-201ENST00000383995 104 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 RNU6-713P-201ENST00000384761 107 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 MIR301A-201ENST00000385261 86 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 SNORD73A-201ENST00000386062 65 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 CYCSP33-201ENST00000414485 327 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 AL356968.1-201ENST00000416622 474 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 BX276092.3-201ENST00000424182 230 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 AL451062.2-201ENST00000427515 271 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 HSPD1P21-201ENST00000436541 245 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 TDGF1P1-201ENST00000445734 527 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 COPS8P2-201ENST00000473228 627 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 AC114801.2-201ENST00000503825 781 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 AC022447.4-201ENST00000504053 364 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 RNU7-4P-201ENST00000516961 62 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 RNU6-1315P-201ENST00000517187 99 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 AC068790.4-201ENST00000602474 263 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 RNA5SP108-201ENST00000605921 117 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 MIR6730-201ENST00000622213 67 ntBASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXD3Q9UJU5 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 MTND5P27-201ENST00000428871 1720 ntBASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 UBE2L2-201ENST00000254302 429 ntBASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 RNU1-19P-201ENST00000363306 165 ntBASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 AC009804.1-201ENST00000400949 179 ntBASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 RNF10P1-201ENST00000418589 369 ntBASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 CFL1P1-202ENST00000432948 411 ntBASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 AL359073.1-201ENST00000448036 403 ntBASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 AL031274.1-201ENST00000450334 232 ntBASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 RN7SL610P-201ENST00000463845 291 ntBASIC5.03□□□□□ -1.6
FOXD3Q9UJU5 RN7SL51P-201ENST00000468230 285 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms