Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC009238.1-201ENST00000442165 424 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.28□□□□□ -2.04
SCN11AQ9UI33 AC009237.6-201ENST00000446969 424 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 XKRYP5-201ENST00000449659 483 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 OR51B8P-201ENST00000449892 769 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 AC090453.1-201ENST00000495560 436 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.28□□□□□ -2.04
SCN11AQ9UI33 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.28□□□□□ -2.04
SCN11AQ9UI33 AC022790.1-201ENST00000522872 204 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 AC104307.1-201ENST00000616142 196 ntBASIC2.28□□□□□ -2.04
SCN11AQ9UI33 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
SCN11AQ9UI33 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.28□□□□□ -2.04
SCN11AQ9UI33 MTND4P34-201ENST00000572715 1371 ntBASIC2.27□□□□□ -2.05
SCN11AQ9UI33 RNU2-17P-201ENST00000410290 190 ntBASIC2.27□□□□□ -2.05
SCN11AQ9UI33 AC092638.1-201ENST00000411966 1275 ntBASIC2.27□□□□□ -2.05
SCN11AQ9UI33 USP9YP6-201ENST00000413550 854 ntBASIC2.27□□□□□ -2.05
SCN11AQ9UI33 AC073464.3-201ENST00000422564 712 ntBASIC2.27□□□□□ -2.05
SCN11AQ9UI33 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.27□□□□□ -2.05
SCN11AQ9UI33 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.27□□□□□ -2.05
SCN11AQ9UI33 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.27□□□□□ -2.05
SCN11AQ9UI33 USP9YP34-201ENST00000453983 808 ntBASIC2.27□□□□□ -2.05
SCN11AQ9UI33 RNU7-157P-201ENST00000459600 66 ntBASIC2.27□□□□□ -2.05
SCN11AQ9UI33 AC055855.1-201ENST00000489563 579 ntBASIC2.27□□□□□ -2.05
SCN11AQ9UI33 MLLT10P2-201ENST00000506434 249 ntBASIC2.27□□□□□ -2.05
SCN11AQ9UI33 AC117532.1-201ENST00000514638 323 ntBASIC2.27□□□□□ -2.05
SCN11AQ9UI33 ARL2BPP2-201ENST00000550907 489 ntBASIC2.27□□□□□ -2.05
SCN11AQ9UI33 BX248123.2-201ENST00000606318 124 ntBASIC2.27□□□□□ -2.05
SCN11AQ9UI33 RMST_2.1-201ENST00000617263 136 ntBASIC2.27□□□□□ -2.05
SCN11AQ9UI33 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN11AQ9UI33 RPS15AP12-201ENST00000419498 388 ntBASIC2.26□□□□□ -2.05
SCN11AQ9UI33 HMGB1P12-201ENST00000438594 598 ntBASIC2.26□□□□□ -2.05
SCN11AQ9UI33 USP9YP15-201ENST00000442391 422 ntBASIC2.26□□□□□ -2.05
SCN11AQ9UI33 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN11AQ9UI33 RPS3AP4-201ENST00000555161 764 ntBASIC2.26□□□□□ -2.05
SCN11AQ9UI33 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SCN11AQ9UI33 AC234775.3-201ENST00000564612 656 ntBASIC2.26□□□□□ -2.05
SCN11AQ9UI33 VN1R74P-201ENST00000613259 503 ntBASIC2.26□□□□□ -2.05
SCN11AQ9UI33 MIR6779-201ENST00000617283 64 ntBASIC2.26□□□□□ -2.05
SCN11AQ9UI33 AC012150.2-201ENST00000621300 544 ntBASIC2.26□□□□□ -2.05
SCN11AQ9UI33 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SCN11AQ9UI33 AC022022.1-201ENST00000430304 178 ntBASIC2.26□□□□□ -2.05
SCN11AQ9UI33 RPS15AP7-201ENST00000439294 405 ntBASIC2.26□□□□□ -2.05
SCN11AQ9UI33 SNRPFP4-201ENST00000456366 242 ntBASIC2.26□□□□□ -2.05
SCN11AQ9UI33 CDC42P1-201ENST00000456658 548 ntBASIC2.26□□□□□ -2.05
SCN11AQ9UI33 AC104564.1-201ENST00000493028 407 ntBASIC2.26□□□□□ -2.05
SCN11AQ9UI33 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.26□□□□□ -2.05
SCN11AQ9UI33 AL049838.1-201ENST00000563647 981 ntBASIC2.26□□□□□ -2.05
SCN11AQ9UI33 AC104581.2-201ENST00000572227 430 ntBASIC2.26□□□□□ -2.05
SCN11AQ9UI33 Z82209.1-201ENST00000422141 2135 ntBASIC2.25□□□□□ -2.05
SCN11AQ9UI33 MTCO1P6-201ENST00000481192 1384 ntBASIC2.25□□□□□ -2.05
SCN11AQ9UI33 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.25□□□□□ -2.05
SCN11AQ9UI33 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SCN11AQ9UI33 RPL17P12-201ENST00000413391 526 ntBASIC2.25□□□□□ -2.05
SCN11AQ9UI33 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.25□□□□□ -2.05
SCN11AQ9UI33 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.25□□□□□ -2.05
SCN11AQ9UI33 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.25□□□□□ -2.05
SCN11AQ9UI33 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.25□□□□□ -2.05
SCN11AQ9UI33 AC090515.1-201ENST00000465295 476 ntBASIC2.25□□□□□ -2.05
SCN11AQ9UI33 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SCN11AQ9UI33 SNORA31.11-201ENST00000516528 139 ntBASIC2.25□□□□□ -2.05
SCN11AQ9UI33 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.25□□□□□ -2.05
SCN11AQ9UI33 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.25□□□□□ -2.05
SCN11AQ9UI33 MIR4419B-201ENST00000577260 68 ntBASIC2.25□□□□□ -2.05
SCN11AQ9UI33 SNORA4-201ENST00000584302 138 ntBASIC2.25□□□□□ -2.05
SCN11AQ9UI33 WISP1-OT1-201ENST00000602893 642 ntBASIC2.25□□□□□ -2.05
SCN11AQ9UI33 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
SCN11AQ9UI33 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
SCN11AQ9UI33 RN7SKP101-201ENST00000411376 320 ntBASIC2.24□□□□□ -2.05
SCN11AQ9UI33 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.24□□□□□ -2.05
SCN11AQ9UI33 AL645568.3-201ENST00000433683 316 ntBASIC2.24□□□□□ -2.05
SCN11AQ9UI33 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.24□□□□□ -2.05
SCN11AQ9UI33 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.24□□□□□ -2.05
SCN11AQ9UI33 AC092473.1-201ENST00000441098 221 ntBASIC2.24□□□□□ -2.05
SCN11AQ9UI33 AC092798.1-201ENST00000458542 409 ntBASIC2.24□□□□□ -2.05
SCN11AQ9UI33 AC091057.2-201ENST00000602594 792 ntBASIC2.24□□□□□ -2.05
SCN11AQ9UI33 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SCN11AQ9UI33 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SCN11AQ9UI33 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.23□□□□□ -2.05
SCN11AQ9UI33 RNU1-109P-201ENST00000383960 147 ntBASIC2.23□□□□□ -2.05
SCN11AQ9UI33 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SCN11AQ9UI33 HMGB1P10-201ENST00000395823 563 ntBASIC2.23□□□□□ -2.05
SCN11AQ9UI33 RPL21P1-201ENST00000399532 476 ntBASIC2.23□□□□□ -2.05
SCN11AQ9UI33 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.23□□□□□ -2.05
SCN11AQ9UI33 WARS2P1-201ENST00000429678 537 ntBASIC2.23□□□□□ -2.05
SCN11AQ9UI33 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SCN11AQ9UI33 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.23□□□□□ -2.05
SCN11AQ9UI33 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
SCN11AQ9UI33 OR4P1P-201ENST00000530808 1136 ntBASIC2.23□□□□□ -2.05
SCN11AQ9UI33 NOP56P3-201ENST00000549457 385 ntBASIC2.23□□□□□ -2.05
SCN11AQ9UI33 MIR4446-201ENST00000578505 67 ntBASIC2.23□□□□□ -2.05
SCN11AQ9UI33 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.23□□□□□ -2.05
SCN11AQ9UI33 AC067838.1-201ENST00000606064 577 ntBASIC2.23□□□□□ -2.05
SCN11AQ9UI33 Y_RNA.191-201ENST00000363972 113 ntBASIC2.23□□□□□ -2.05
SCN11AQ9UI33 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.23□□□□□ -2.05
SCN11AQ9UI33 SSXP1-201ENST00000453640 473 ntBASIC2.23□□□□□ -2.05
SCN11AQ9UI33 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.23□□□□□ -2.05
SCN11AQ9UI33 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.23□□□□□ -2.05
SCN11AQ9UI33 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.23□□□□□ -2.05
SCN11AQ9UI33 MTCO3P24-201ENST00000572729 782 ntBASIC2.23□□□□□ -2.05
SCN11AQ9UI33 MTND4P1-201ENST00000457501 1466 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms