Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 RPL21P5-201ENST00000554662 472 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 AL121579.1-201ENST00000555129 305 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 TVP23BP1-201ENST00000557500 617 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 MIR4719-201ENST00000585233 84 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 AC022916.3-201ENST00000592961 742 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 LARP7P1-201ENST00000605576 316 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 AL590099.1-201ENST00000615276 138 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 AC092794.2-201ENST00000620933 563 ntBASIC4.62□□□□□ -1.67
USP25Q9UHP3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
USP25Q9UHP3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.62□□□□□ -1.67
USP25Q9UHP3 AC116667.1-201ENST00000604855 2072 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
USP25Q9UHP3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
USP25Q9UHP3 MIR423-201ENST00000362201 94 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 SNORA60-201ENST00000362396 134 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 RNA5SP509-201ENST00000364577 119 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 RNA5SP189-201ENST00000364920 115 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 Y_RNA.296-201ENST00000364930 108 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 Y_RNA.372-201ENST00000365599 102 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 MTCO3P40-201ENST00000392516 676 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 GSTA9P-201ENST00000406231 611 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 RHEBP3-201ENST00000411920 351 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 CCDC58P2-201ENST00000417131 366 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 OR1AA1P-201ENST00000419597 916 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.61□□□□□ -1.67
USP25Q9UHP3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.61□□□□□ -1.67
USP25Q9UHP3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.61□□□□□ -1.67
USP25Q9UHP3 AC019235.1-201ENST00000503847 207 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 KCTD9P5-201ENST00000504141 1170 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.61□□□□□ -1.67
USP25Q9UHP3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.61□□□□□ -1.67
USP25Q9UHP3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.61□□□□□ -1.67
USP25Q9UHP3 RNU6-1003P-201ENST00000517099 105 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.61□□□□□ -1.67
USP25Q9UHP3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.61□□□□□ -1.67
USP25Q9UHP3 AP004242.1-201ENST00000533701 349 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.61□□□□□ -1.67
USP25Q9UHP3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.61□□□□□ -1.67
USP25Q9UHP3 AC022968.1-201ENST00000567372 442 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.61□□□□□ -1.67
USP25Q9UHP3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.61□□□□□ -1.67
USP25Q9UHP3 MIR4644-201ENST00000579929 84 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 MIR3682-201ENST00000581338 84 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 MIR5096-201ENST00000583713 70 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.61□□□□□ -1.67
USP25Q9UHP3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 DUXAP9-208ENST00000622815 614 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 AC005609.4-201ENST00000625071 447 ntBASIC4.61□□□□□ -1.67
USP25Q9UHP3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.61□□□□□ -1.67
USP25Q9UHP3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
USP25Q9UHP3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.61□□□□□ -1.67
USP25Q9UHP3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.61□□□□□ -1.67
USP25Q9UHP3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.61□□□□□ -1.67
USP25Q9UHP3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
USP25Q9UHP3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 AC139713.2-214ENST00000642059 1811 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USP25Q9UHP3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
USP25Q9UHP3 SNORA31-201ENST00000362607 130 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 AL049693.1-201ENST00000402760 611 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 TOMM22P1-201ENST00000418578 312 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 RPL36AP36-201ENST00000418616 301 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 snoU13.24-201ENST00000458998 104 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 AC011276.1-201ENST00000469688 323 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 AC010285.1-201ENST00000470580 392 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 HMGB1P22-201ENST00000505315 124 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 RNA5SP309-201ENST00000516670 106 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 AP001893.2-201ENST00000526949 202 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 AC109635.4-202ENST00000531666 412 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 AL391840.1-201ENST00000571144 367 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 MIR4284-201ENST00000578924 81 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 AC068790.4-201ENST00000602474 263 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 AL359999.1-201ENST00000604513 294 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 PISRT1-201ENST00000626175 531 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 MIR6863-201ENST00000636112 90 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
USP25Q9UHP3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 AP001350.1-201ENST00000601906 1524 ntBASIC4.6□□□□□ -1.67
USP25Q9UHP3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
USP25Q9UHP3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.6□□□□□ -1.67
USP25Q9UHP3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
USP25Q9UHP3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
USP25Q9UHP3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms