Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 RNU6-146P-201ENST00000384602 108 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 MIR568-201ENST00000385036 95 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 MTCYBP4-201ENST00000401524 249 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AL591848.1-201ENST00000413092 322 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC137499.1-201ENST00000427602 88 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC010733.1-201ENST00000451515 401 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 RNU7-152P-201ENST00000458982 64 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 PPIAP21-201ENST00000464473 501 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC006967.1-201ENST00000467608 589 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC006511.1-201ENST00000470614 315 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC090686.1-201ENST00000481577 749 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC025164.1-201ENST00000496249 478 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 SCARNA22-201ENST00000503991 125 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC093767.1-201ENST00000504523 156 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC093303.1-201ENST00000514549 295 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC093853.1-201ENST00000515689 483 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 RNU6-864P-201ENST00000516256 108 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 PTP4A1P6-201ENST00000531034 478 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC109635.4-202ENST00000531666 412 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 MIR4775-201ENST00000581168 75 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC006006.1-201ENST00000603082 144 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC008782.1-201ENST00000603386 430 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC245517.5-201ENST00000611529 162 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 uc_338.22-201ENST00000622722 187 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC067931.1-201ENST00000624190 671 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC011460.1-201ENST00000636268 1834 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 MTND4P1-201ENST00000457501 1466 ntBASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PARPBPQ9NWS1 XPOTP1-201ENST00000443317 2398 ntBASIC4.21□□□□□ -1.73
PARPBPQ9NWS1 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 Y_RNA.378-201ENST00000365652 113 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 RNU6-639P-201ENST00000384074 107 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 MIR19A-201ENST00000384878 82 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 MIR558-201ENST00000384920 94 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 U3.20-201ENST00000390909 217 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AP000580.1-201ENST00000404439 358 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 RNU2-39P-201ENST00000410604 198 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 RNU6-603P-201ENST00000411403 107 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AL360081.1-201ENST00000428299 555 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AC005154.2-201ENST00000438110 379 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 RPL21P89-201ENST00000444021 467 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AC020550.1-201ENST00000447385 163 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 Y_RNA.635-201ENST00000459041 101 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AC021382.1-201ENST00000483523 359 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AC020890.1-201ENST00000491837 504 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AC083829.1-201ENST00000503756 657 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 CCDC34P1-201ENST00000507441 517 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 PTP4A1P4-201ENST00000512479 322 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 COX6CP5-201ENST00000527162 228 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 RN7SL652P-201ENST00000577769 300 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 MIR4270-201ENST00000581799 70 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AC024940.4-201ENST00000605507 246 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AC090425.1-201ENST00000610007 140 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 uc_338.18-201ENST00000615451 175 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 AL713922.2-201ENST00000619384 716 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 MIR6715B-201ENST00000637172 77 ntBASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PARPBPQ9NWS1 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms