Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 MIR626-201ENST00000385032 94 ntBASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 AC004692.1-201ENST00000455430 424 ntBASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 snoU13.6-201ENST00000458785 104 ntBASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 AC022730.1-201ENST00000473114 568 ntBASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 RPL30P12-201ENST00000474666 353 ntBASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 RNU6-589P-201ENST00000516485 107 ntBASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 LINC00933-203ENST00000559812 219 ntBASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 CYCSP39-201ENST00000565821 309 ntBASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 5S_rRNA.23-201ENST00000612086 102 ntBASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 AL445647.2-201ENST00000615170 130 ntBASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 AL356585.10-201ENST00000641883 123 ntBASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
FOXD4L1Q9NU39 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 RNA5SP333-201ENST00000363466 118 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 RNA5SP334-201ENST00000364825 118 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 RNU6-793P-201ENST00000384233 104 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 RN7SKP53-201ENST00000411337 315 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 AC134879.1-201ENST00000426062 394 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 SNRPEP9-201ENST00000436794 238 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 GAPDHP20-201ENST00000444107 1007 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 SNORA58-201ENST00000505219 137 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 RNA5SP518-201ENST00000515957 119 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 Y_RNA.712-201ENST00000517011 92 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 MIR3646-201ENST00000578301 84 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 MIR4258-201ENST00000580920 91 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 AC005255.1-201ENST00000593748 216 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 AL589674.2-201ENST00000604304 337 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 AC005070.2-201ENST00000604391 260 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 AC019159.1-201ENST00000605094 187 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 MIR3674-201ENST00000636576 68 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 MTND5P32-201ENST00000560711 1802 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 AL450326.2-201ENST00000421913 1962 ntBASIC8□□□□□ -1.13
FOXD4L1Q9NU39 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC8□□□□□ -1.13
FOXD4L1Q9NU39 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 PARP4P2-201ENST00000446672 3326 ntBASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 SNORD56.1-201ENST00000362913 68 ntBASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 RN7SKP55-201ENST00000364888 307 ntBASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 SNORA66-201ENST00000384792 133 ntBASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 CYP4F34P-201ENST00000425951 481 ntBASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 AC100832.1-201ENST00000471945 383 ntBASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 AL031846.1-201ENST00000560933 314 ntBASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 AP002826.1-201ENST00000608835 315 ntBASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
FOXD4L1Q9NU39 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
FOXD4L1Q9NU39 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
FOXD4L1Q9NU39 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
FOXD4L1Q9NU39 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms