Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 AL136360.1-201ENST00000503377 1900 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 RNU6-185P-201ENST00000384421 107 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 SNORA46.1-201ENST00000391069 153 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 RNA5SP354-201ENST00000391247 136 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 AL445529.1-201ENST00000398713 389 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 SFR1P1-201ENST00000403720 688 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 SNORD23.1-201ENST00000408212 104 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 RNU4-53P-201ENST00000410828 140 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 Z92545.1-201ENST00000411782 234 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 NPM1P11-201ENST00000417106 855 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 MYL8P-204ENST00000431574 518 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 UBE2V1P13-201ENST00000436983 439 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 AL645638.1-201ENST00000440519 361 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 MTCYBP12-201ENST00000440559 1134 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 AC010099.1-201ENST00000455434 375 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 MTCYBP14-201ENST00000457471 715 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 RPL31P41-201ENST00000477967 372 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 EIF4EP3-201ENST00000498782 656 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 AC108157.1-201ENST00000510511 539 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 AC108120.2-201ENST00000512973 294 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 RNU6-1004P-201ENST00000516584 111 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 BTF3P12-201ENST00000519620 469 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 IGKV3-31-201ENST00000523109 329 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 COX6CP5-201ENST00000527162 228 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 OR5AQ1P-201ENST00000527596 927 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 MTCO1P40-201ENST00000574371 625 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 AC017100.2-201ENST00000584628 355 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 uc_338.20-201ENST00000621563 178 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 AC010680.1-201ENST00000590024 3590 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 AL359893.1-201ENST00000447628 1580 ntBASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
CDC42SE2Q9NRR3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 NSRP1P1-201ENST00000444067 1693 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 U3.26-201ENST00000391236 204 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 TANK-206ENST00000406287 875 ntTSL 5 BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 TPTE2P6-202ENST00000445572 1007 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 HMGB1P48-201ENST00000446155 598 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 AC092798.1-201ENST00000458542 409 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 RN7SL274P-201ENST00000492268 272 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 MTCO2P9-201ENST00000503214 694 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 AC104090.1-201ENST00000506341 1171 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 NDUFB4P2-201ENST00000509515 391 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 SNORA31.18-201ENST00000517043 134 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 FAM92A1P1-201ENST00000528023 890 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 CYCSP26-201ENST00000534107 320 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 HSPE1P3-201ENST00000559254 309 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 AC009063.1-201ENST00000563342 702 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 AC087481.2-201ENST00000565492 330 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 OR4G1P-201ENST00000588632 938 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 AL161629.2-201ENST00000615347 275 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 AC010378.1-201ENST00000619270 362 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 AC007998.5-201ENST00000622938 237 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 AL356266.1-201ENST00000623311 483 ntBASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDC42SE2Q9NRR3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.36□□□□□ -2.19
CDC42SE2Q9NRR3 ZNF90P1-201ENST00000480493 1951 ntBASIC1.36□□□□□ -2.19
CDC42SE2Q9NRR3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CDC42SE2Q9NRR3 RNU6-263P-201ENST00000363811 107 ntBASIC1.36□□□□□ -2.19
CDC42SE2Q9NRR3 SNORA3A-201ENST00000364113 130 ntBASIC1.36□□□□□ -2.19
CDC42SE2Q9NRR3 MIR17-201ENST00000385012 84 ntBASIC1.36□□□□□ -2.19
CDC42SE2Q9NRR3 MIR483-201ENST00000385070 76 ntBASIC1.36□□□□□ -2.19
CDC42SE2Q9NRR3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CDC42SE2Q9NRR3 AL024474.1-201ENST00000404655 591 ntBASIC1.36□□□□□ -2.19
CDC42SE2Q9NRR3 RNU4-78P-201ENST00000410940 126 ntBASIC1.36□□□□□ -2.19
CDC42SE2Q9NRR3 RNA5SP489-201ENST00000410986 109 ntBASIC1.36□□□□□ -2.19
CDC42SE2Q9NRR3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.36□□□□□ -2.19
CDC42SE2Q9NRR3 AL139156.1-201ENST00000412785 841 ntBASIC1.36□□□□□ -2.19
CDC42SE2Q9NRR3 AC105402.1-201ENST00000413336 545 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms