Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC022861.1-201ENST00000522981 663 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AP004247.1-201ENST00000531556 1289 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC013828.2-201ENST00000532487 235 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC012213.3-201ENST00000577199 777 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC022146.1-201ENST00000595307 847 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 BNIP3P23-201ENST00000599655 511 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC025588.3-201ENST00000604182 274 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC112187.2-201ENST00000604345 283 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC245389.1-201ENST00000605141 529 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC087752.4-201ENST00000605911 462 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC090186.1-201ENST00000605991 572 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC097468.3-201ENST00000607956 456 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC103710.4-201ENST00000609301 899 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC009509.4-201ENST00000619202 509 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AC034229.5-201ENST00000624258 185 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AL592437.2-201ENST00000421655 2434 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 AL356473.1-201ENST00000406203 1408 ntBASIC3.43□□□□□ -1.86
SIX2Q9NPC8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.43□□□□□ -1.86
SIX2Q9NPC8 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 FGF7P2-201ENST00000332473 296 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 RNU5F-7P-201ENST00000363696 115 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 RNU4-75P-201ENST00000364621 146 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 SNORD82-201ENST00000365530 70 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 Y_RNA.559-201ENST00000384686 107 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 RNY3P10-201ENST00000384764 102 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 MIR320C1-201ENST00000408566 88 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 OR51AB1P-201ENST00000429046 620 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 MUPP-201ENST00000438111 566 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AC002381.1-201ENST00000447049 280 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 PAXBP1P1-201ENST00000449315 447 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AC005297.2-201ENST00000450430 606 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 ELOCP23-201ENST00000452014 332 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AL445669.2-201ENST00000454425 421 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 RNA5SP269-201ENST00000459032 137 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 RPL21P10-201ENST00000463521 490 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AC106872.3-201ENST00000495104 446 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 TXNP6-201ENST00000510190 310 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AC024589.1-201ENST00000512207 263 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 RN7SKP234-201ENST00000517173 224 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 NCAPGP2-201ENST00000557911 754 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 MIR544B-201ENST00000582372 78 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 MIR3611-201ENST00000584484 83 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AC083760.1-201ENST00000589621 670 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AC090116.1-201ENST00000615679 446 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AC015967.1-201ENST00000619893 476 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AL445264.1-201ENST00000621719 171 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AL139811.1-201ENST00000424779 2299 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SIX2Q9NPC8 AL359893.1-201ENST00000447628 1580 ntBASIC3.42□□□□□ -1.86
SIX2Q9NPC8 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 ZNF33CP-201ENST00000432492 2030 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SIX2Q9NPC8 AC006378.2-201ENST00000623178 2476 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 MIR449B-201ENST00000384995 97 ntBASIC3.41□□□□□ -1.86
SIX2Q9NPC8 MTCYBP36-201ENST00000404146 440 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms