Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.9□□□□□ -1.79
CDT1Q9H211 OR2B8P-201ENST00000432841 938 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.9□□□□□ -1.79
CDT1Q9H211 RSU1P2-202ENST00000437884 485 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 RBMX2P4-201ENST00000441256 376 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 SSXP1-201ENST00000453640 473 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 AL121877.1-201ENST00000453704 622 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 AP001992.1-205ENST00000462248 379 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 AC146507.1-201ENST00000468335 354 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.9□□□□□ -1.79
CDT1Q9H211 PTGES3P3-201ENST00000511479 482 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 AC008489.1-201ENST00000524271 483 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDT1Q9H211 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.9□□□□□ -1.79
CDT1Q9H211 EEF1B2P4-201ENST00000551398 348 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 AL133241.1-201ENST00000556832 487 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 ZNF519P3-201ENST00000557158 1032 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.9□□□□□ -1.79
CDT1Q9H211 MIR3944-201ENST00000581277 108 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 AC006116.10-201ENST00000591836 581 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.9□□□□□ -1.79
CDT1Q9H211 BNIP3P30-201ENST00000601184 574 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 AC024220.1-201ENST00000603675 484 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.9□□□□□ -1.79
CDT1Q9H211 AL589743.7-201ENST00000612637 233 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 AL391261.4-201ENST00000616012 481 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.9□□□□□ -1.79
CDT1Q9H211 AL357559.1-201ENST00000622228 274 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 AC093591.3-201ENST00000634516 308 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 AC006378.2-201ENST00000623178 2476 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDT1Q9H211 AL365440.1-201ENST00000436135 2167 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 PABPC1P7-201ENST00000413177 1513 ntBASIC3.9□□□□□ -1.79
CDT1Q9H211 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDT1Q9H211 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
CDT1Q9H211 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDT1Q9H211 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDT1Q9H211 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CDT1Q9H211 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDT1Q9H211 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDT1Q9H211 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDT1Q9H211 RNY4P24-201ENST00000362735 96 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 RNU4-91P-201ENST00000364778 135 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 SNORA70.4-201ENST00000365509 134 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 RNU6-744P-201ENST00000365557 107 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
CDT1Q9H211 RNU6-1316P-201ENST00000384242 108 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 RNU6-339P-201ENST00000384310 107 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 RNU6-769P-201ENST00000384407 104 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 Y_RNA.554-201ENST00000384672 102 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 MIR218-2-201ENST00000385006 110 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 LAP3P1-201ENST00000403648 294 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 RNU2-15P-201ENST00000410692 191 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 MTCO1P17-201ENST00000411522 491 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 CRYBB2P1-203ENST00000415709 538 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 AC127526.1-201ENST00000417526 366 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AC068533.1-201ENST00000418542 415 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 MRPS10P2-201ENST00000431226 381 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 ATP5JP1-201ENST00000431631 322 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 CKS1BP5-201ENST00000434172 273 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 AC073063.1-201ENST00000434352 607 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 RPL23AP33-201ENST00000442301 452 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AP000542.1-201ENST00000448473 371 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.89□□□□□ -1.79
CDT1Q9H211 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AC027673.1-201ENST00000456245 405 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 RPL7L1P8-201ENST00000469911 741 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AC110768.1-201ENST00000509222 400 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 RN7SKP83-201ENST00000516512 178 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AC103843.2-201ENST00000530523 682 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AC006065.5-201ENST00000623427 349 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.89□□□□□ -1.79
CDT1Q9H211 AC099654.12-201ENST00000639868 649 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 AL732372.2-225ENST00000642124 456 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.89□□□□□ -1.79
CDT1Q9H211 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDT1Q9H211 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDT1Q9H211 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDT1Q9H211 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.89□□□□□ -1.79
CDT1Q9H211 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDT1Q9H211 RNU5E-5P-201ENST00000365379 116 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 RNU6-259P-201ENST00000383999 107 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 Y_RNA.493-201ENST00000384422 102 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 U3.29-201ENST00000391296 212 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms