Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 RNU6-88P-201ENST00000606801 100 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 AC004009.2-201ENST00000623016 728 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 AC010149.2-201ENST00000637608 315 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 AC017071.1-201ENST00000564407 2204 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 RNU6-28P-201ENST00000362378 107 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 RNU6-989P-201ENST00000362756 107 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 RNU6-931P-201ENST00000363850 107 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 AL590084.2-201ENST00000401481 382 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 DHFRP6-201ENST00000401776 268 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 AL356131.1-201ENST00000405826 414 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 MIR320C1-201ENST00000408566 88 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 AL356968.1-201ENST00000416622 474 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 AIMP1P1-201ENST00000418670 937 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 AC083875.1-201ENST00000419509 405 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 PTP4A1P5-201ENST00000420305 455 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 SNRPEP7-201ENST00000438350 220 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 RPL23AP67-201ENST00000465341 474 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 ST13P14-201ENST00000474095 734 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 AC147055.4-201ENST00000504399 745 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 HIGD1AP13-201ENST00000509878 289 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 AC017037.2-201ENST00000513850 890 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 MTND5P4-201ENST00000514978 288 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 RNU6-237P-201ENST00000515985 71 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 RNU6-27P-201ENST00000516146 107 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 DUXAP5-201ENST00000529668 529 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 CYCSP39-201ENST00000565821 309 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 AC025588.4-201ENST00000615802 908 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 AC091925.2-201ENST00000625059 256 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 CRYM-AS1-204ENST00000637983 556 ntBASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ZNF541Q9H0D2 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 MIR22-201ENST00000362190 85 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 Y_RNA.18-201ENST00000362461 102 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 AL136116.1-201ENST00000403591 381 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 RAP1BP1-201ENST00000412709 553 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 RPL7P30-201ENST00000420888 709 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 AL513174.1-201ENST00000423182 629 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 AC092447.3-201ENST00000426027 686 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 AL590233.1-201ENST00000430017 456 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 TXNP1-201ENST00000441872 371 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 RPS24P13-201ENST00000442520 397 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 ARPC3P5-201ENST00000448802 534 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 RPL7P52-201ENST00000449200 742 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 SUMO2P2-201ENST00000456482 255 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 RPS4XP22-201ENST00000480755 780 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 AC023424.2-201ENST00000493479 777 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 AL133507.1-201ENST00000605269 557 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 AC120349.3-201ENST00000624377 529 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 AL022578.1-201ENST00000439330 1433 ntBASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ZNF541Q9H0D2 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms