Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 SRP72P2-201ENST00000344851 1979 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
MEIS3Q99687 RNU5F-6P-201ENST00000362979 116 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
MEIS3Q99687 RNU6-1042P-201ENST00000384204 107 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 RNU6-225P-201ENST00000384613 103 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
MEIS3Q99687 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.93□□□□□ -1.78
MEIS3Q99687 RNA5SP498-201ENST00000411342 120 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.93□□□□□ -1.78
MEIS3Q99687 CCDC58P2-201ENST00000417131 366 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 BOLA3P4-201ENST00000418151 400 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 AL353678.1-201ENST00000422735 741 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.93□□□□□ -1.78
MEIS3Q99687 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.93□□□□□ -1.78
MEIS3Q99687 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.93□□□□□ -1.78
MEIS3Q99687 AC006028.1-201ENST00000438379 402 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 AL662791.1-201ENST00000441992 928 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 RPS12P18-201ENST00000442381 270 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.93□□□□□ -1.78
MEIS3Q99687 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.93□□□□□ -1.78
MEIS3Q99687 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.93□□□□□ -1.78
MEIS3Q99687 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.93□□□□□ -1.78
MEIS3Q99687 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.93□□□□□ -1.78
MEIS3Q99687 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.93□□□□□ -1.78
MEIS3Q99687 RPL9P6-201ENST00000492764 598 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.93□□□□□ -1.78
MEIS3Q99687 SNX5P1-201ENST00000505757 1041 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 AF131216.2-201ENST00000512316 564 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 SNORA64.4-201ENST00000516632 81 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 OR4A45P-201ENST00000529954 901 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 AP002453.2-201ENST00000533503 320 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.93□□□□□ -1.78
MEIS3Q99687 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.93□□□□□ -1.78
MEIS3Q99687 AC004217.3-201ENST00000551552 878 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.93□□□□□ -1.78
MEIS3Q99687 AC018552.3-201ENST00000567416 561 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.93□□□□□ -1.78
MEIS3Q99687 AC083760.1-201ENST00000589621 670 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.93□□□□□ -1.78
MEIS3Q99687 VN1R92P-201ENST00000598511 928 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.93□□□□□ -1.78
MEIS3Q99687 AC017083.3-201ENST00000609955 700 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 MIR8057-201ENST00000620957 69 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 ELF2P3-201ENST00000445099 1506 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
MEIS3Q99687 AC073346.2-201ENST00000624724 2058 ntBASIC3.93□□□□□ -1.78
MEIS3Q99687 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
MEIS3Q99687 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
MEIS3Q99687 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
MEIS3Q99687 RIOK3P1-201ENST00000418778 1528 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
MEIS3Q99687 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
MEIS3Q99687 RNU6-501P-201ENST00000364072 100 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 SNORA38.1-201ENST00000364172 131 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 Y_RNA.256-201ENST00000364594 104 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.92□□□□□ -1.78
MEIS3Q99687 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
MEIS3Q99687 SNORD67-201ENST00000390833 111 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.92□□□□□ -1.78
MEIS3Q99687 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.92□□□□□ -1.78
MEIS3Q99687 AC009237.2-201ENST00000421358 284 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 AL512649.1-201ENST00000428997 581 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.92□□□□□ -1.78
MEIS3Q99687 DNAJC19P4-201ENST00000440115 345 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
MEIS3Q99687 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.92□□□□□ -1.78
MEIS3Q99687 AC003071.1-201ENST00000451219 789 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 AC243772.1-201ENST00000451620 410 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.92□□□□□ -1.78
MEIS3Q99687 RNU7-27P-201ENST00000459281 62 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.92□□□□□ -1.78
MEIS3Q99687 AC015724.1-201ENST00000478577 156 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.92□□□□□ -1.78
MEIS3Q99687 OR4G11P-201ENST00000492842 939 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.92□□□□□ -1.78
MEIS3Q99687 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.92□□□□□ -1.78
MEIS3Q99687 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.92□□□□□ -1.78
MEIS3Q99687 PTGES3P3-201ENST00000511479 482 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 RN7SKP57-201ENST00000517248 293 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 IGHV3-32-201ENST00000519182 355 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.92□□□□□ -1.78
MEIS3Q99687 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.92□□□□□ -1.78
MEIS3Q99687 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.92□□□□□ -1.78
MEIS3Q99687 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.92□□□□□ -1.78
MEIS3Q99687 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.92□□□□□ -1.78
MEIS3Q99687 MIR5195-201ENST00000583555 115 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.92□□□□□ -1.78
MEIS3Q99687 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.92□□□□□ -1.78
MEIS3Q99687 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.92□□□□□ -1.78
MEIS3Q99687 AP004247.3-201ENST00000608682 624 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.92□□□□□ -1.78
MEIS3Q99687 AC103710.4-201ENST00000609301 899 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 AC078899.5-201ENST00000612475 178 ntBASIC3.92□□□□□ -1.78
MEIS3Q99687 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.92□□□□□ -1.78
MEIS3Q99687 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
MEIS3Q99687 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
MEIS3Q99687 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
MEIS3Q99687 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms