Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 RN7SL274P-201ENST00000492268 272 ntBASIC1.47□□□□□ -2.17
SPENQ96T58 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SPENQ96T58 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.47□□□□□ -2.17
SPENQ96T58 AC080078.3-201ENST00000605407 463 ntBASIC1.47□□□□□ -2.17
SPENQ96T58 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.47□□□□□ -2.17
SPENQ96T58 AL512430.2-201ENST00000406786 339 ntBASIC1.47□□□□□ -2.17
SPENQ96T58 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.47□□□□□ -2.17
SPENQ96T58 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SPENQ96T58 AL359273.1-201ENST00000510918 627 ntBASIC1.47□□□□□ -2.17
SPENQ96T58 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.47□□□□□ -2.17
SPENQ96T58 7SK.7-201ENST00000603504 247 ntBASIC1.47□□□□□ -2.17
SPENQ96T58 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
SPENQ96T58 RNU1-42P-201ENST00000364033 160 ntBASIC1.46□□□□□ -2.18
SPENQ96T58 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.46□□□□□ -2.18
SPENQ96T58 AC090774.1-201ENST00000435925 246 ntBASIC1.46□□□□□ -2.18
SPENQ96T58 AC079804.2-201ENST00000490376 200 ntBASIC1.46□□□□□ -2.18
SPENQ96T58 RNU2-58P-201ENST00000516403 183 ntBASIC1.46□□□□□ -2.18
SPENQ96T58 GLYCAM1-201ENST00000546596 285 ntBASIC1.46□□□□□ -2.18
SPENQ96T58 AL031274.2-201ENST00000599419 203 ntBASIC1.46□□□□□ -2.18
SPENQ96T58 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SPENQ96T58 RNU1-93P-201ENST00000364704 169 ntBASIC1.46□□□□□ -2.18
SPENQ96T58 MIR1323-201ENST00000408090 73 ntBASIC1.46□□□□□ -2.18
SPENQ96T58 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.46□□□□□ -2.18
SPENQ96T58 AC027673.1-201ENST00000456245 405 ntBASIC1.46□□□□□ -2.18
SPENQ96T58 HMGB3P26-201ENST00000560051 582 ntBASIC1.46□□□□□ -2.18
SPENQ96T58 AC098848.2-201ENST00000588023 330 ntBASIC1.46□□□□□ -2.18
SPENQ96T58 AC091895.1-201ENST00000624494 256 ntBASIC1.46□□□□□ -2.18
SPENQ96T58 MTND5P7-201ENST00000413558 1798 ntBASIC1.46□□□□□ -2.18
SPENQ96T58 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SPENQ96T58 ZNF876P-202ENST00000398732 1485 ntBASIC1.46□□□□□ -2.18
SPENQ96T58 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.46□□□□□ -2.18
SPENQ96T58 BNIP3P2-201ENST00000441221 577 ntBASIC1.46□□□□□ -2.18
SPENQ96T58 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.46□□□□□ -2.18
SPENQ96T58 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.46□□□□□ -2.18
SPENQ96T58 AC092954.1-201ENST00000609121 445 ntBASIC1.46□□□□□ -2.18
SPENQ96T58 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SPENQ96T58 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
SPENQ96T58 RNU6-60P-201ENST00000364792 103 ntBASIC1.45□□□□□ -2.18
SPENQ96T58 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
SPENQ96T58 RNU1-139P-201ENST00000391307 165 ntBASIC1.45□□□□□ -2.18
SPENQ96T58 HMGB3P2-201ENST00000411913 584 ntBASIC1.45□□□□□ -2.18
SPENQ96T58 AL162388.1-201ENST00000450912 352 ntBASIC1.45□□□□□ -2.18
SPENQ96T58 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.45□□□□□ -2.18
SPENQ96T58 AC109486.1-201ENST00000486833 374 ntBASIC1.45□□□□□ -2.18
SPENQ96T58 AL137100.2-201ENST00000555786 315 ntBASIC1.45□□□□□ -2.18
SPENQ96T58 AC024614.2-201ENST00000577584 372 ntBASIC1.45□□□□□ -2.18
SPENQ96T58 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.45□□□□□ -2.18
SPENQ96T58 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.45□□□□□ -2.18
SPENQ96T58 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.45□□□□□ -2.18
SPENQ96T58 Y_RNA.433-201ENST00000384089 102 ntBASIC1.45□□□□□ -2.18
SPENQ96T58 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.45□□□□□ -2.18
SPENQ96T58 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.45□□□□□ -2.18
SPENQ96T58 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.45□□□□□ -2.18
SPENQ96T58 SNORA70.14-201ENST00000516205 110 ntBASIC1.45□□□□□ -2.18
SPENQ96T58 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
SPENQ96T58 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.45□□□□□ -2.18
SPENQ96T58 AL121821.2-201ENST00000556081 394 ntBASIC1.45□□□□□ -2.18
SPENQ96T58 AC012150.2-201ENST00000621300 544 ntBASIC1.45□□□□□ -2.18
SPENQ96T58 RNU6-174P-201ENST00000410406 106 ntBASIC1.45□□□□□ -2.18
SPENQ96T58 AL049830.2-201ENST00000480072 201 ntBASIC1.45□□□□□ -2.18
SPENQ96T58 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.45□□□□□ -2.18
SPENQ96T58 AC107294.3-201ENST00000609211 526 ntBASIC1.45□□□□□ -2.18
SPENQ96T58 WWP1P1-201ENST00000466609 2769 ntBASIC1.45□□□□□ -2.18
SPENQ96T58 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SPENQ96T58 RNU6-882P-201ENST00000391025 103 ntBASIC1.44□□□□□ -2.18
SPENQ96T58 MTND4P13-201ENST00000402078 1023 ntBASIC1.44□□□□□ -2.18
SPENQ96T58 RPS27P5-201ENST00000444247 244 ntBASIC1.44□□□□□ -2.18
SPENQ96T58 AF131216.2-201ENST00000512316 564 ntBASIC1.44□□□□□ -2.18
SPENQ96T58 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.44□□□□□ -2.18
SPENQ96T58 MIR98-201ENST00000606724 119 ntBASIC1.44□□□□□ -2.18
SPENQ96T58 AC016590.3-201ENST00000611171 753 ntBASIC1.44□□□□□ -2.18
SPENQ96T58 PWAR6-201ENST00000552334 4618 ntBASIC1.44□□□□□ -2.18
SPENQ96T58 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
SPENQ96T58 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.44□□□□□ -2.18
SPENQ96T58 HAR1A.1-201ENST00000459583 118 ntBASIC1.44□□□□□ -2.18
SPENQ96T58 RNU6-1223P-201ENST00000517124 104 ntBASIC1.44□□□□□ -2.18
SPENQ96T58 MIR4506-201ENST00000584693 77 ntBASIC1.44□□□□□ -2.18
SPENQ96T58 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.44□□□□□ -2.18
SPENQ96T58 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.44□□□□□ -2.18
SPENQ96T58 ABI1P1-201ENST00000603375 1120 ntBASIC1.44□□□□□ -2.18
SPENQ96T58 AL445213.1-201ENST00000412589 747 ntBASIC1.43□□□□□ -2.18
SPENQ96T58 TRIAP1P1-201ENST00000427062 225 ntBASIC1.43□□□□□ -2.18
SPENQ96T58 AC091544.1-201ENST00000484702 348 ntBASIC1.43□□□□□ -2.18
SPENQ96T58 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.43□□□□□ -2.18
SPENQ96T58 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SPENQ96T58 MIR4448-201ENST00000584360 86 ntBASIC1.43□□□□□ -2.18
SPENQ96T58 AC073348.1-201ENST00000623002 331 ntBASIC1.43□□□□□ -2.18
SPENQ96T58 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SPENQ96T58 Z98749.2-208ENST00000381646 500 ntBASIC1.43□□□□□ -2.18
SPENQ96T58 RNU6-1032P-201ENST00000384100 107 ntBASIC1.43□□□□□ -2.18
SPENQ96T58 AL136133.1-201ENST00000413694 376 ntBASIC1.43□□□□□ -2.18
SPENQ96T58 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.43□□□□□ -2.18
SPENQ96T58 SUMO2P6-201ENST00000505273 288 ntBASIC1.43□□□□□ -2.18
SPENQ96T58 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
SPENQ96T58 AC090751.1-201ENST00000566966 267 ntBASIC1.43□□□□□ -2.18
SPENQ96T58 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.43□□□□□ -2.18
SPENQ96T58 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.43□□□□□ -2.18
SPENQ96T58 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.43□□□□□ -2.18
SPENQ96T58 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SPENQ96T58 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms