Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CSPG4P5Q96PW8 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSPG4P5Q96PW8 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.7□□□□□ -1.98
CSPG4P5Q96PW8 AC123904.3-201ENST00000547218 814 ntBASIC2.7□□□□□ -1.98
CSPG4P5Q96PW8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.7□□□□□ -1.98
CSPG4P5Q96PW8 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CSPG4P5Q96PW8 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.7□□□□□ -1.98
CSPG4P5Q96PW8 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.7□□□□□ -1.98
CSPG4P5Q96PW8 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CSPG4P5Q96PW8 AC007275.1-201ENST00000621243 671 ntBASIC2.7□□□□□ -1.98
CSPG4P5Q96PW8 AC026634.1-201ENST00000634369 198 ntBASIC2.7□□□□□ -1.98
CSPG4P5Q96PW8 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.7□□□□□ -1.98
CSPG4P5Q96PW8 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.7□□□□□ -1.98
CSPG4P5Q96PW8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSPG4P5Q96PW8 RNU1-100P-201ENST00000365255 165 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 U3.26-201ENST00000391236 204 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 ARF4P3-201ENST00000397387 509 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 BX682237.1-201ENST00000415016 335 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 RPLP0P7-201ENST00000416050 667 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 BOLA3P4-201ENST00000418151 400 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 AL137014.1-201ENST00000420490 1226 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 MTND4P15-201ENST00000437913 1033 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 SNORD109B-201ENST00000458961 67 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 SNORD109A-201ENST00000459128 67 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 AC078857.1-201ENST00000469870 667 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 AIG1P1-201ENST00000503376 148 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 AC026801.2-201ENST00000515352 425 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 RNA5SP282-201ENST00000516355 108 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 AC090502.2-201ENST00000549267 280 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 AP003973.1-201ENST00000604639 691 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 BX664608.1-201ENST00000610519 487 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 AL356585.4-201ENST00000623078 1229 ntBASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CSPG4P5Q96PW8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 MTCO1P4-201ENST00000520516 1409 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 RNU6-859P-201ENST00000362728 107 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 Y_RNA.111-201ENST00000363248 100 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 AL035405.1-201ENST00000400795 710 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 AC092634.6-201ENST00000418558 192 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 USP9YP20-201ENST00000419224 558 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 MTCO3P1-205ENST00000422088 832 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 RPL27AP8-201ENST00000424277 446 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 AL831737.1-201ENST00000441288 271 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 BTBD7P2-201ENST00000441962 620 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 AP000936.2-201ENST00000447151 681 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 SNRPGP6-201ENST00000451124 220 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 SETP11-201ENST00000473027 690 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 AC013828.1-201ENST00000481845 158 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 AC096576.1-201ENST00000489014 359 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 AC006445.2-201ENST00000510061 472 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 AP000889.1-201ENST00000530968 660 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 OR7K1P-201ENST00000546439 926 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 AF131215.7-201ENST00000602443 707 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 AC092954.1-201ENST00000609121 445 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 AL118556.2-201ENST00000614375 824 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 SCARNA15.3-201ENST00000626315 122 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 SCARNA4.1-201ENST00000628597 123 ntBASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.68□□□□□ -1.98
CSPG4P5Q96PW8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 RNA5SP139-201ENST00000364340 117 ntBASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 RNU6-609P-201ENST00000365459 107 ntBASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 RNU6-878P-201ENST00000384578 110 ntBASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 RNU6-882P-201ENST00000391025 103 ntBASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 AL139095.1-201ENST00000404326 391 ntBASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 RNU2-28P-201ENST00000410457 189 ntBASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 RNU2-52P-201ENST00000410680 190 ntBASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 RAC1P8-201ENST00000427086 527 ntBASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 PSMA6P3-201ENST00000428242 164 ntBASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 RPL17P35-201ENST00000432217 549 ntBASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 NDUFB4P6-201ENST00000436819 366 ntBASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 RAC1P7-201ENST00000445367 377 ntBASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 SEM1P1-201ENST00000506694 209 ntBASIC2.67□□□□□ -1.98
CSPG4P5Q96PW8 SNORA48.10-201ENST00000516965 160 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms