Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AL391994.1-201ENST00000254724 282 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 RNU1-75P-201ENST00000347264 129 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AL161781.1-201ENST00000354277 403 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AL359837.1-201ENST00000381357 287 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 MIR1284-201ENST00000408337 120 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 RNA5SP38-201ENST00000410750 119 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AC093578.1-201ENST00000415219 368 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 RPL36AP36-201ENST00000418616 301 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AL365338.1-201ENST00000422282 858 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AL365203.2-201ENST00000423444 196 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AL590383.1-201ENST00000428602 75 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AL356867.1-201ENST00000429623 299 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 MTCYBP45-201ENST00000435243 565 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 RPL21P23-201ENST00000446654 460 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AL133547.1-201ENST00000448546 220 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AC104563.1-201ENST00000476147 376 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AC112198.1-201ENST00000505369 1220 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 TXNP6-201ENST00000510190 310 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 RNY4P37-201ENST00000516225 96 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 MTCO1P47-201ENST00000523889 1271 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AC105224.1-201ENST00000587055 421 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 VN1R90P-201ENST00000595717 726 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 VN1R82P-201ENST00000601481 356 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 MIR6130-201ENST00000619419 109 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 SNORA50A-202ENST00000629536 136 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 MIR4275-201ENST00000636486 87 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AC011460.1-201ENST00000636268 1834 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 AL022578.1-201ENST00000439330 1433 ntBASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDLIM5Q96HC4 FAM35BP-202ENST00000497389 3337 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 RNU6-1200P-201ENST00000384162 107 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 SNORD17-201ENST00000390930 237 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC126124.2-201ENST00000413542 321 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 Z99755.1-201ENST00000414048 380 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC098592.1-201ENST00000419352 333 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 RPS15AP6-201ENST00000420703 385 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC090960.1-201ENST00000421072 306 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 MTND4P20-201ENST00000424125 869 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 SNRPEP7-201ENST00000438350 220 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 RNU7-125P-201ENST00000458760 62 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC147055.4-201ENST00000504399 745 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC111000.2-201ENST00000507775 550 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC017037.2-201ENST00000513850 890 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC026801.2-201ENST00000515352 425 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 DEFB131D-201ENST00000526803 184 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 OR6C7P-201ENST00000547875 934 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC002400.1-201ENST00000569310 726 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC006130.2-201ENST00000586202 326 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC008507.1-201ENST00000587506 734 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC006270.3-201ENST00000605967 1036 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC080013.6-201ENST00000606185 215 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AL445264.1-201ENST00000621719 171 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC039056.2-201ENST00000622261 511 ntBASIC3.34□□□□□ -1.87
PDLIM5Q96HC4 AC243312.2-201ENST00000623340 601 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms