Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC013476.2-201ENST00000614456 459 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SKA1Q96BD8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SKA1Q96BD8 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SKA1Q96BD8 OR4G2P-202ENST00000641004 1759 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 AL138713.1-201ENST00000624026 2130 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 RNA5SP399-201ENST00000364003 117 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 RPL21P17-201ENST00000397467 475 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 TAAR7P-201ENST00000436141 242 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 SETD6P1-201ENST00000444575 317 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 AL162389.1-201ENST00000449233 177 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 AC072039.1-201ENST00000477611 581 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 AC135721.1-201ENST00000497954 479 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 HSPE1P23-201ENST00000509838 286 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 AC112673.1-201ENST00000513168 575 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 RN7SKP83-201ENST00000516512 178 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SKA1Q96BD8 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 AL355836.1-201ENST00000555951 870 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 OR4H12P-201ENST00000556269 907 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 MIR3609-201ENST00000582661 80 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 UBE2L4-201ENST00000587688 464 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 AC103710.4-201ENST00000609301 899 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 AC012314.7-201ENST00000619693 93 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 AL158801.5-201ENST00000623123 465 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 AP000676.3-201ENST00000623299 569 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 AC008993.2-201ENST00000631744 806 ntBASIC3.86□□□□□ -1.79
SKA1Q96BD8 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SKA1Q96BD8 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SKA1Q96BD8 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SKA1Q96BD8 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SKA1Q96BD8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SKA1Q96BD8 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SKA1Q96BD8 RNA5SP124-201ENST00000362739 110 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 SNORA5A-201ENST00000384111 134 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 SOD2P1-201ENST00000396543 562 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.85□□□□□ -1.79
SKA1Q96BD8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.85□□□□□ -1.79
SKA1Q96BD8 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.85□□□□□ -1.79
SKA1Q96BD8 RPS29P31-201ENST00000446147 164 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 TPT1P14-201ENST00000448018 505 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 DNAJC19P1-201ENST00000455312 319 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SKA1Q96BD8 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.85□□□□□ -1.79
SKA1Q96BD8 AC006445.2-201ENST00000510061 472 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.85□□□□□ -1.79
SKA1Q96BD8 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 OR5G4P-201ENST00000525251 760 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 CASP1P1-201ENST00000526345 212 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.85□□□□□ -1.79
SKA1Q96BD8 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.85□□□□□ -1.79
SKA1Q96BD8 YPEL5P3-201ENST00000547227 352 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 CCNG2P1-201ENST00000549521 1000 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 OR4T1P-201ENST00000554933 911 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.85□□□□□ -1.79
SKA1Q96BD8 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.85□□□□□ -1.79
SKA1Q96BD8 AC079089.3-201ENST00000603094 673 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 AC004908.2-201ENST00000609090 574 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 AC069200.1-201ENST00000609511 323 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 TUG1_2.1-201ENST00000614234 87 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 AC090132.2-201ENST00000615881 347 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.85□□□□□ -1.79
SKA1Q96BD8 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.85□□□□□ -1.79
SKA1Q96BD8 AC091965.5-201ENST00000624785 342 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.85□□□□□ -1.79
SKA1Q96BD8 AC009093.8-201ENST00000641769 292 ntBASIC3.85□□□□□ -1.79
SKA1Q96BD8 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SKA1Q96BD8 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.85□□□□□ -1.79
SKA1Q96BD8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.85□□□□□ -1.79
SKA1Q96BD8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SKA1Q96BD8 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.85□□□□□ -1.79
SKA1Q96BD8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
SKA1Q96BD8 AC092125.1-201ENST00000562568 1995 ntBASIC3.84□□□□□ -1.79
SKA1Q96BD8 AC110774.1-201ENST00000623567 2018 ntBASIC3.84□□□□□ -1.79
SKA1Q96BD8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SKA1Q96BD8 RNY4P24-201ENST00000362735 96 ntBASIC3.84□□□□□ -1.79
SKA1Q96BD8 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SKA1Q96BD8 RNU6-769P-201ENST00000384407 104 ntBASIC3.84□□□□□ -1.79
SKA1Q96BD8 RPL23AP39-201ENST00000415533 405 ntBASIC3.84□□□□□ -1.79
SKA1Q96BD8 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms