Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC114786.4-201ENST00000508771 728 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.78□□□□□ -1.64
ERCC4Q92889 SEPT14P4-201ENST00000513445 186 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.78□□□□□ -1.64
ERCC4Q92889 FO082796.1-201ENST00000523795 183 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.78□□□□□ -1.64
ERCC4Q92889 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.78□□□□□ -1.64
ERCC4Q92889 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.78□□□□□ -1.64
ERCC4Q92889 AC060771.1-201ENST00000582031 164 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.78□□□□□ -1.64
ERCC4Q92889 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.78□□□□□ -1.64
ERCC4Q92889 AC004853.1-201ENST00000604902 698 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.78□□□□□ -1.64
ERCC4Q92889 uc_338.12-201ENST00000616344 181 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.78□□□□□ -1.64
ERCC4Q92889 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.78□□□□□ -1.64
ERCC4Q92889 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.78□□□□□ -1.64
ERCC4Q92889 AC024614.3-201ENST00000637860 256 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ERCC4Q92889 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ERCC4Q92889 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
ERCC4Q92889 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
ERCC4Q92889 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
ERCC4Q92889 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ERCC4Q92889 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ERCC4Q92889 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
ERCC4Q92889 RNA5SP306-201ENST00000411087 107 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 FAR2P2-201ENST00000413041 594 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.77□□□□□ -1.65
ERCC4Q92889 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.77□□□□□ -1.65
ERCC4Q92889 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.77□□□□□ -1.65
ERCC4Q92889 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.77□□□□□ -1.65
ERCC4Q92889 FAR2P4-202ENST00000425399 584 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 FTH1P6-201ENST00000430768 320 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 AL606489.2-201ENST00000433886 234 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 GPR143P-201ENST00000434155 205 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 AL356276.2-201ENST00000435919 558 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 AC016691.1-201ENST00000441321 413 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.77□□□□□ -1.65
ERCC4Q92889 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.77□□□□□ -1.65
ERCC4Q92889 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.77□□□□□ -1.65
ERCC4Q92889 AL162591.2-201ENST00000449634 317 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.77□□□□□ -1.65
ERCC4Q92889 SNRPGP6-201ENST00000451124 220 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.77□□□□□ -1.65
ERCC4Q92889 RNU6-261P-201ENST00000459506 102 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.77□□□□□ -1.65
ERCC4Q92889 MTND3P22-201ENST00000510932 243 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.77□□□□□ -1.65
ERCC4Q92889 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.77□□□□□ -1.65
ERCC4Q92889 TRAV8-5-201ENST00000537369 341 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.77□□□□□ -1.65
ERCC4Q92889 TOMM20P2-201ENST00000540082 421 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 HIF1AP1-201ENST00000553642 175 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 AC068831.4-201ENST00000556118 109 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.77□□□□□ -1.65
ERCC4Q92889 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.77□□□□□ -1.65
ERCC4Q92889 AC068790.3-201ENST00000602988 553 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 AC007566.2-201ENST00000603642 413 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 AC025588.3-201ENST00000604182 274 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 AC115621.1-201ENST00000604653 858 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 AC110741.2-201ENST00000605278 268 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 BNIP3P10-201ENST00000605360 577 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 TUG1_1.1-201ENST00000610654 145 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.77□□□□□ -1.65
ERCC4Q92889 AC099654.10-201ENST00000640395 161 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.77□□□□□ -1.65
ERCC4Q92889 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ERCC4Q92889 AC125257.1-201ENST00000560400 2930 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
ERCC4Q92889 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ERCC4Q92889 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
ERCC4Q92889 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ERCC4Q92889 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.77□□□□□ -1.65
ERCC4Q92889 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.77□□□□□ -1.65
ERCC4Q92889 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
ERCC4Q92889 AC025031.4-201ENST00000621248 3271 ntBASIC4.77□□□□□ -1.65
ERCC4Q92889 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.77□□□□□ -1.65
ERCC4Q92889 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC4Q92889 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC4Q92889 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
ERCC4Q92889 AC007685.1-201ENST00000329806 452 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 RNA5SP332-201ENST00000391063 115 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.76□□□□□ -1.65
ERCC4Q92889 ELOCP4-201ENST00000420090 333 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 EIF1P3-201ENST00000423841 334 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.76□□□□□ -1.65
ERCC4Q92889 RPL23AP1-201ENST00000428990 471 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC4Q92889 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC4Q92889 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.76□□□□□ -1.65
ERCC4Q92889 AL359893.1-201ENST00000447628 1580 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 AC114755.5-201ENST00000447760 831 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.76□□□□□ -1.65
ERCC4Q92889 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.76□□□□□ -1.65
ERCC4Q92889 UBDP1-202ENST00000457888 382 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.76□□□□□ -1.65
ERCC4Q92889 RPS26P15-201ENST00000488067 348 ntBASIC4.76□□□□□ -1.65
ERCC4Q92889 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
ERCC4Q92889 RN7SL812P-201ENST00000493791 279 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms