Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.35□□□□□ -1.71
PIK3C3Q8NEB9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PIK3C3Q8NEB9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PIK3C3Q8NEB9 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PIK3C3Q8NEB9 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
PIK3C3Q8NEB9 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.35□□□□□ -1.71
PIK3C3Q8NEB9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.35□□□□□ -1.71
PIK3C3Q8NEB9 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 INTS6P1-201ENST00000504674 2530 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 RN7SKP95-201ENST00000362860 303 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 Y_RNA.100-201ENST00000363141 102 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 SNORA62.1-201ENST00000364287 154 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 SNORA32.2-201ENST00000384049 122 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 CYB5AP4-201ENST00000396692 399 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 AL645927.1-201ENST00000396783 406 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 RNA5SP107-201ENST00000411358 122 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 MTND3P8-201ENST00000412909 339 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 AC005517.2-201ENST00000424673 553 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 MRPL50P4-201ENST00000446432 475 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 MTND1P18-201ENST00000448191 573 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 AL121877.1-201ENST00000453704 622 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 AC234775.1-201ENST00000454247 670 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 RPS29P15-201ENST00000458329 171 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 SCARNA10-201ENST00000459255 330 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 AC007547.1-201ENST00000462177 490 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 RPL7P19-201ENST00000469948 618 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 RPL23AP11-201ENST00000475260 469 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 AC006499.6-201ENST00000511169 607 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 Y_RNA.701-201ENST00000516812 110 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 RNA5SP503-201ENST00000517047 117 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 RNU6-1314P-201ENST00000517139 104 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 BTF3P12-201ENST00000519620 469 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 SUMO2P20-201ENST00000520803 283 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 AC107953.1-201ENST00000522216 297 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 DEFB108D-201ENST00000527787 222 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 AP000676.2-201ENST00000529711 301 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 ANP32BP3-201ENST00000559213 706 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 MIR4646-201ENST00000580775 63 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 AC022726.1-201ENST00000587475 207 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 AC007687.1-201ENST00000602704 304 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 AC020910.3-201ENST00000603701 874 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 RNU6-89P-201ENST00000606519 100 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 AP001486.3-201ENST00000615334 372 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 MIR7155-201ENST00000615925 56 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 MTND4P35-201ENST00000604257 1375 ntBASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PIK3C3Q8NEB9 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
PIK3C3Q8NEB9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
PIK3C3Q8NEB9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 MTCO1P24-201ENST00000515438 1558 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 AC067945.1-201ENST00000342609 618 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 RNU6-552P-201ENST00000362869 119 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 RNU6-179P-201ENST00000363350 107 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 RNU5E-6P-201ENST00000365574 115 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 U3.30-201ENST00000391308 210 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 RPL32P23-201ENST00000397237 405 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 AL122016.1-201ENST00000403365 367 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 RNU2-36P-201ENST00000410361 191 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 RNU4-65P-201ENST00000410473 140 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 RN7SKP140-201ENST00000411196 284 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 OR6C66P-201ENST00000414917 930 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 AC004552.1-201ENST00000419089 348 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 AC112498.1-201ENST00000444401 332 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 AL513533.1-201ENST00000453728 415 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 RN7SL329P-201ENST00000467740 299 ntBASIC4.33□□□□□ -1.72
PIK3C3Q8NEB9 RPS26P3-201ENST00000470205 348 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms