Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 AC069061.3-201ENST00000582254 823 ntBASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 AC010525.2-201ENST00000590920 195 ntBASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 AC007566.2-201ENST00000603642 413 ntBASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 Z98200.1-201ENST00000607298 470 ntBASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 AL590099.1-201ENST00000615276 138 ntBASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 AC002550.2-201ENST00000621246 394 ntBASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 AL157700.1-201ENST00000561973 1432 ntBASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 CPHL1P-201ENST00000461341 3407 ntBASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PNLDC1Q8NA58 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 RNA5SP443-201ENST00000363083 132 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 SNORD113.2-201ENST00000364166 89 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 Y_RNA.255-201ENST00000364581 97 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 SNORA70F-201ENST00000384142 135 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 RNU6-606P-201ENST00000384721 111 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 RPL32P23-201ENST00000397237 405 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 AL356432.1-201ENST00000405809 419 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 RNU6-373P-201ENST00000411247 98 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 AC137499.1-201ENST00000427602 88 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 SRIP2-201ENST00000428470 166 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 DNAJC19P7-201ENST00000428811 344 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 AC093156.1-201ENST00000440382 670 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 RNU7-63P-201ENST00000459054 62 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 RPL37P6-202ENST00000464216 403 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 AC017037.2-201ENST00000513850 890 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 RNU6-1153P-201ENST00000516760 105 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 SNORD60.2-201ENST00000516883 86 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 IGLVIV-53-201ENST00000520107 367 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 PSMA2P1-201ENST00000526365 646 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 OR4R1P-201ENST00000529879 463 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 OR5AL2P-201ENST00000532185 920 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 OR5BN1P-201ENST00000532955 829 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 AC105129.1-201ENST00000560250 297 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 CYP4A43P-201ENST00000568156 121 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 MIR4795-201ENST00000584182 89 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 AL121992.2-201ENST00000606262 256 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 AL132765.2-201ENST00000610812 351 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 AL354950.2-201ENST00000617939 290 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 AP005019.3-201ENST00000620418 560 ntBASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PNLDC1Q8NA58 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PNLDC1Q8NA58 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.84□□□□□ -1.8
PNLDC1Q8NA58 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PNLDC1Q8NA58 AC016588.2-201ENST00000632484 3021 ntBASIC3.84□□□□□ -1.8
PNLDC1Q8NA58 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 SAGE2P-201ENST00000420011 2126 ntBASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 AC011266.1-201ENST00000624119 3569 ntBASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 RNU6-511P-201ENST00000363496 107 ntBASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 RNU5E-8P-201ENST00000363502 116 ntBASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 RNA5SP505-201ENST00000364748 108 ntBASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 RNU6-339P-201ENST00000384310 107 ntBASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 SNORD51-201ENST00000384320 80 ntBASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 EEF1A1P40-201ENST00000412883 573 ntBASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.83□□□□□ -1.8
PNLDC1Q8NA58 AL132765.1-201ENST00000434165 553 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms