Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 TXNP6-201ENST00000510190 310 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC110792.2-201ENST00000510278 224 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 RNU6-237P-201ENST00000515985 71 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC044913.1-201ENST00000557200 430 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AL845331.3-202ENST00000562856 261 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AL512347.1-201ENST00000566420 503 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AL158827.2-201ENST00000602494 330 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC068313.1-201ENST00000604028 1008 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC025811.1-201ENST00000604312 472 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC105148.1-201ENST00000604961 409 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 RNU4-5P-201ENST00000607255 135 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC067852.7-201ENST00000623270 535 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC004943.3-201ENST00000624116 600 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC026634.1-201ENST00000634369 198 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AL691447.3-201ENST00000635020 330 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 RNU6-216P-201ENST00000363282 104 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AL449283.1-202ENST00000418249 604 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AL137014.1-201ENST00000420490 1226 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 DPRXP1-201ENST00000426312 460 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 RPS20P5-201ENST00000434808 360 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 UBE2D3P1-201ENST00000436669 444 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 MTCO2P20-201ENST00000437339 673 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AL662791.1-201ENST00000441992 928 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AL034418.1-201ENST00000448675 860 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 NAP1L1P3-201ENST00000462291 880 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 OR4G11P-201ENST00000492842 939 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC114322.1-201ENST00000506771 926 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 SNORA19.3-201ENST00000516165 130 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 RNA5SP468-201ENST00000516782 93 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AP000873.5-201ENST00000533906 236 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC128657.1-201ENST00000549459 145 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC016877.3-201ENST00000606778 504 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AC016716.1-201ENST00000265882 708 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 snoZ40.1-201ENST00000364540 72 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 RNU6-441P-201ENST00000384545 106 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 MIR504-201ENST00000385065 83 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 RNU4-53P-201ENST00000410828 140 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AL136133.1-201ENST00000413694 376 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 FCF1P2-201ENST00000415284 583 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 USP9YP20-201ENST00000419224 558 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 RPS15AP40-201ENST00000419621 391 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 MTCYBP32-201ENST00000427945 1084 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AL645638.1-201ENST00000440519 361 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AC104058.1-201ENST00000448028 297 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 HMGB1P15-201ENST00000453854 435 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AC093767.1-201ENST00000504523 156 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AC234781.5-201ENST00000508429 271 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 MTCYBP16-201ENST00000509187 1129 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 XKRY-201ENST00000510392 1100 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 RN7SKP24-201ENST00000515888 284 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 ARL2BPP5-201ENST00000523141 481 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AC139103.1-201ENST00000534696 1030 ntBASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.36□□□□□ -2.03
COL27A1Q8IZC6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms