Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.89□□□□□ -1.63
UBE3DQ7Z6J8 AL451142.2-201ENST00000429076 2090 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 GVINP1-202ENST00000531871 7271 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 AC074029.4-201ENST00000624796 1859 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 Y_RNA.39-201ENST00000362620 98 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 RNU6-379P-201ENST00000363813 104 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 Y_RNA.257-201ENST00000364596 102 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 Y_RNA.480-201ENST00000384364 102 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 AC013442.1-201ENST00000397347 228 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 AL603908.1-201ENST00000406098 201 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 RNA5SP111-201ENST00000411386 101 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 RPS23P10-201ENST00000416185 486 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 UBE2V1P4-201ENST00000425374 344 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 RPS26P47-201ENST00000427219 348 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 AC016712.1-201ENST00000431088 378 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 BX323845.1-201ENST00000432417 179 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 AC092647.2-201ENST00000452998 253 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 RPL37P6-201ENST00000460682 294 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 AC010631.1-201ENST00000474150 156 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 RN7SL30P-201ENST00000488416 306 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 RPL22P13-201ENST00000493291 347 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 CEACAMP10-202ENST00000495431 496 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 AC022493.2-201ENST00000506122 481 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 AC022790.1-201ENST00000522872 204 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 AC006272.2-201ENST00000594725 163 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 AC011494.1-201ENST00000596454 237 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 AC104763.2-201ENST00000604179 382 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 AC062037.2-201ENST00000610137 73 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 AC107871.2-201ENST00000612894 502 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
UBE3DQ7Z6J8 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 AC004817.4-201ENST00000602396 3625 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 U3.7-201ENST00000363668 216 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 RNU6-701P-201ENST00000384059 107 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 RN7SKP114-201ENST00000410327 279 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 RN7SKP126-201ENST00000411143 300 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 AL137014.1-201ENST00000420490 1226 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 AL355433.1-201ENST00000422804 300 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 AL590632.1-201ENST00000424289 371 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 RPL12P34-201ENST00000424532 479 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 MRPS18BP2-201ENST00000434310 759 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 RPL21P103-201ENST00000479921 488 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 RN7SL727P-201ENST00000482164 296 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 AC008953.1-201ENST00000497334 318 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 SNRPCP2-201ENST00000504370 475 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 RNA5SP230-201ENST00000517039 122 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 AC090022.1-201ENST00000546569 311 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 MIR4512-201ENST00000583257 77 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 AC092447.9-201ENST00000603395 144 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 AL034351.1-201ENST00000605288 668 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 AC018889.1-201ENST00000605372 397 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 AC020634.1-201ENST00000608701 549 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 HMGB1P24-202ENST00000615653 685 ntBASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.87□□□□□ -1.63
UBE3DQ7Z6J8 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
UBE3DQ7Z6J8 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms