Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 Y_RNA.89-201ENST00000363031 102 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 RNU6-1085P-201ENST00000363576 107 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 MTND4LP20-201ENST00000402379 270 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 RNU2-8P-201ENST00000410727 190 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 RN7SKP167-201ENST00000411047 285 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AMD1P2-201ENST00000412936 992 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AC138393.2-201ENST00000414742 246 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AC007283.2-201ENST00000424739 197 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 EZH2P1-201ENST00000431167 291 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AL353691.1-201ENST00000451332 387 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AC104308.1-201ENST00000454621 333 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 snoU13.8-201ENST00000458890 104 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AF213884.1-201ENST00000488102 463 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AC055855.1-201ENST00000489563 579 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 IGKV2D-36-201ENST00000518643 226 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 IGLVIV-53-201ENST00000520107 367 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AP003497.1-201ENST00000528472 562 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AL512360.1-201ENST00000555346 234 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AC025678.1-201ENST00000567861 338 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 RN7SL703P-201ENST00000578485 302 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 BNIP3P33-201ENST00000598912 569 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AC068790.5-201ENST00000602741 355 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AC008536.2-201ENST00000607284 349 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AC139792.3-201ENST00000623525 224 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AC008785.1-201ENST00000624475 456 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 MIR1321-201ENST00000637766 79 ntBASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.34□□□□□ -1.87
C9orf139Q6ZV77 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
C9orf139Q6ZV77 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 RNU6-97P-201ENST00000363387 104 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 SNORA72.1-201ENST00000363485 129 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 Y_RNA.295-201ENST00000364918 102 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 MIR554-201ENST00000384874 96 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 RPS3AP24-201ENST00000407896 734 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 RNU2-15P-201ENST00000410692 191 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 JKAMPP1-201ENST00000413804 919 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AC009237.5-201ENST00000414271 501 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 USP9YP27-201ENST00000418455 438 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AL139413.1-201ENST00000421309 217 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 RPL7P2-201ENST00000427639 268 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AL590399.6-201ENST00000446396 307 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 FGF7P3-201ENST00000454645 303 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 SNORA84-201ENST00000459229 133 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 RPS4XP10-201ENST00000465034 731 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 RPS29P25-201ENST00000481709 171 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AC110792.1-201ENST00000491826 472 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 OR5H5P-201ENST00000503164 928 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AC117522.1-201ENST00000509821 380 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 TMEM248P1-201ENST00000510579 951 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AC023141.12-201ENST00000512399 199 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 RNU6-528P-201ENST00000516926 100 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 RNU6-1220P-201ENST00000517126 108 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 MTND1P35-201ENST00000526739 508 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AC109635.3-201ENST00000529536 185 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AP000907.2-201ENST00000530827 353 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 SUB1P2-201ENST00000556401 297 ntBASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.33□□□□□ -1.88
C9orf139Q6ZV77 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms