Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CDC42BPAQ5VT25 RNU6-60P-201ENST00000364792 103 ntBASIC2.41□□□□□ -2.02
CDC42BPAQ5VT25 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CDC42BPAQ5VT25 XKRYP4-201ENST00000414395 483 ntBASIC2.41□□□□□ -2.02
CDC42BPAQ5VT25 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.41□□□□□ -2.02
CDC42BPAQ5VT25 XKRYP5-201ENST00000449659 483 ntBASIC2.41□□□□□ -2.02
CDC42BPAQ5VT25 AC104308.1-201ENST00000454621 333 ntBASIC2.41□□□□□ -2.02
CDC42BPAQ5VT25 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.41□□□□□ -2.02
CDC42BPAQ5VT25 RPL37P25-201ENST00000507308 276 ntBASIC2.41□□□□□ -2.02
CDC42BPAQ5VT25 AC021146.7-201ENST00000509604 775 ntBASIC2.41□□□□□ -2.02
CDC42BPAQ5VT25 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.41□□□□□ -2.02
CDC42BPAQ5VT25 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.41□□□□□ -2.02
CDC42BPAQ5VT25 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.41□□□□□ -2.02
CDC42BPAQ5VT25 HPVC1-201ENST00000629899 1198 ntBASIC2.41□□□□□ -2.02
CDC42BPAQ5VT25 Y_RNA.116-201ENST00000363292 103 ntBASIC2.4□□□□□ -2.02
CDC42BPAQ5VT25 RNA5SP393-201ENST00000363423 117 ntBASIC2.4□□□□□ -2.02
CDC42BPAQ5VT25 DPPA3P1-201ENST00000448050 469 ntBASIC2.4□□□□□ -2.02
CDC42BPAQ5VT25 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CDC42BPAQ5VT25 AC108734.3-201ENST00000481241 1165 ntBASIC2.4□□□□□ -2.02
CDC42BPAQ5VT25 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.4□□□□□ -2.02
CDC42BPAQ5VT25 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.4□□□□□ -2.02
CDC42BPAQ5VT25 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.4□□□□□ -2.02
CDC42BPAQ5VT25 AL512598.1-201ENST00000610158 273 ntBASIC2.4□□□□□ -2.02
CDC42BPAQ5VT25 AC098679.5-201ENST00000624394 571 ntBASIC2.4□□□□□ -2.02
CDC42BPAQ5VT25 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDC42BPAQ5VT25 AC109780.2-201ENST00000413467 845 ntBASIC2.39□□□□□ -2.03
CDC42BPAQ5VT25 PAICSP7-201ENST00000419829 962 ntBASIC2.39□□□□□ -2.03
CDC42BPAQ5VT25 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.39□□□□□ -2.03
CDC42BPAQ5VT25 RPS15AP36-201ENST00000492022 382 ntBASIC2.39□□□□□ -2.03
CDC42BPAQ5VT25 RPL23AP55-201ENST00000498163 452 ntBASIC2.39□□□□□ -2.03
CDC42BPAQ5VT25 RNA5SP445-201ENST00000515889 115 ntBASIC2.39□□□□□ -2.03
CDC42BPAQ5VT25 MIR3618-201ENST00000580330 88 ntBASIC2.39□□□□□ -2.03
CDC42BPAQ5VT25 AP001029.3-201ENST00000588063 596 ntBASIC2.39□□□□□ -2.03
CDC42BPAQ5VT25 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CDC42BPAQ5VT25 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CDC42BPAQ5VT25 MIR518E-201ENST00000385252 88 ntBASIC2.39□□□□□ -2.03
CDC42BPAQ5VT25 RNU2-37P-201ENST00000410695 177 ntBASIC2.39□□□□□ -2.03
CDC42BPAQ5VT25 RNA5SP489-201ENST00000410986 109 ntBASIC2.39□□□□□ -2.03
CDC42BPAQ5VT25 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.39□□□□□ -2.03
CDC42BPAQ5VT25 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.39□□□□□ -2.03
CDC42BPAQ5VT25 AC121758.2-201ENST00000553271 193 ntBASIC2.39□□□□□ -2.03
CDC42BPAQ5VT25 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.38□□□□□ -2.03
CDC42BPAQ5VT25 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.38□□□□□ -2.03
CDC42BPAQ5VT25 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.38□□□□□ -2.03
CDC42BPAQ5VT25 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.38□□□□□ -2.03
CDC42BPAQ5VT25 RPS15AP1-201ENST00000457423 391 ntBASIC2.38□□□□□ -2.03
CDC42BPAQ5VT25 AC084851.1-201ENST00000529105 249 ntBASIC2.38□□□□□ -2.03
CDC42BPAQ5VT25 DUXAP9-208ENST00000622815 614 ntBASIC2.38□□□□□ -2.03
CDC42BPAQ5VT25 RNA5SP295-201ENST00000362655 121 ntBASIC2.37□□□□□ -2.03
CDC42BPAQ5VT25 MIR499A-201ENST00000384903 122 ntBASIC2.37□□□□□ -2.03
CDC42BPAQ5VT25 AC009237.2-201ENST00000421358 284 ntBASIC2.37□□□□□ -2.03
CDC42BPAQ5VT25 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.37□□□□□ -2.03
CDC42BPAQ5VT25 snoU13.18-201ENST00000459483 104 ntBASIC2.37□□□□□ -2.03
CDC42BPAQ5VT25 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDC42BPAQ5VT25 AC135721.1-201ENST00000497954 479 ntBASIC2.37□□□□□ -2.03
CDC42BPAQ5VT25 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.37□□□□□ -2.03
CDC42BPAQ5VT25 AC007115.1-201ENST00000546853 234 ntBASIC2.37□□□□□ -2.03
CDC42BPAQ5VT25 MIR3935-201ENST00000583472 104 ntBASIC2.37□□□□□ -2.03
CDC42BPAQ5VT25 RPS29P20-201ENST00000489592 171 ntBASIC2.37□□□□□ -2.03
CDC42BPAQ5VT25 RN7SKP82-201ENST00000516786 223 ntBASIC2.37□□□□□ -2.03
CDC42BPAQ5VT25 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.37□□□□□ -2.03
CDC42BPAQ5VT25 MIR4278-201ENST00000636094 69 ntBASIC2.37□□□□□ -2.03
CDC42BPAQ5VT25 Y_RNA.40-201ENST00000362645 93 ntBASIC2.36□□□□□ -2.03
CDC42BPAQ5VT25 RNU1-42P-201ENST00000364033 160 ntBASIC2.36□□□□□ -2.03
CDC42BPAQ5VT25 Y_RNA.269-201ENST00000364685 89 ntBASIC2.36□□□□□ -2.03
CDC42BPAQ5VT25 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.36□□□□□ -2.03
CDC42BPAQ5VT25 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.36□□□□□ -2.03
CDC42BPAQ5VT25 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CDC42BPAQ5VT25 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CDC42BPAQ5VT25 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDC42BPAQ5VT25 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CDC42BPAQ5VT25 AL391987.6-201ENST00000305671 199 ntBASIC2.35□□□□□ -2.03
CDC42BPAQ5VT25 AC011155.1-201ENST00000316512 456 ntBASIC2.35□□□□□ -2.03
CDC42BPAQ5VT25 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.35□□□□□ -2.03
CDC42BPAQ5VT25 SNORA7.1-201ENST00000363750 139 ntBASIC2.35□□□□□ -2.03
CDC42BPAQ5VT25 RNU4-52P-201ENST00000384209 138 ntBASIC2.35□□□□□ -2.03
CDC42BPAQ5VT25 SNRPEP2-201ENST00000397592 279 ntBASIC2.35□□□□□ -2.03
CDC42BPAQ5VT25 RNU6-603P-201ENST00000411403 107 ntBASIC2.35□□□□□ -2.03
CDC42BPAQ5VT25 AC092832.1-201ENST00000422934 400 ntBASIC2.35□□□□□ -2.03
CDC42BPAQ5VT25 RPS29P29-201ENST00000456396 171 ntBASIC2.35□□□□□ -2.03
CDC42BPAQ5VT25 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CDC42BPAQ5VT25 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CDC42BPAQ5VT25 AC098848.2-201ENST00000588023 330 ntBASIC2.35□□□□□ -2.03
CDC42BPAQ5VT25 WISP1-OT1-201ENST00000602893 642 ntBASIC2.35□□□□□ -2.03
CDC42BPAQ5VT25 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CDC42BPAQ5VT25 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CDC42BPAQ5VT25 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.35□□□□□ -2.03
CDC42BPAQ5VT25 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.34□□□□□ -2.03
CDC42BPAQ5VT25 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.34□□□□□ -2.03
CDC42BPAQ5VT25 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.34□□□□□ -2.03
CDC42BPAQ5VT25 AC087441.2-201ENST00000529141 262 ntBASIC2.34□□□□□ -2.03
CDC42BPAQ5VT25 SNORD53B-201ENST00000577887 78 ntBASIC2.34□□□□□ -2.03
CDC42BPAQ5VT25 OR4K8P-201ENST00000578842 1048 ntBASIC2.34□□□□□ -2.03
CDC42BPAQ5VT25 AL159169.2-201ENST00000610061 1269 ntBASIC2.34□□□□□ -2.03
CDC42BPAQ5VT25 AC105429.2-201ENST00000610567 517 ntBASIC2.34□□□□□ -2.03
CDC42BPAQ5VT25 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDC42BPAQ5VT25 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CDC42BPAQ5VT25 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
CDC42BPAQ5VT25 AC013404.1-201ENST00000413068 249 ntBASIC2.34□□□□□ -2.04
CDC42BPAQ5VT25 HMGN1P8-201ENST00000463578 288 ntBASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms