Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC1.12□□□□□ -2.23
UBR4Q5T4S7 OR4A45P-201ENST00000529954 901 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 MIR5089-201ENST00000580047 84 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.12□□□□□ -2.23
UBR4Q5T4S7 AC146944.4-201ENST00000602697 718 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
UBR4Q5T4S7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
UBR4Q5T4S7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
UBR4Q5T4S7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
UBR4Q5T4S7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC1.12□□□□□ -2.23
UBR4Q5T4S7 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.12□□□□□ -2.23
UBR4Q5T4S7 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
UBR4Q5T4S7 FABP5P12-201ENST00000515543 389 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 AP000907.2-201ENST00000530827 353 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 AC092851.1-201ENST00000535964 478 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 AC006272.2-201ENST00000594725 163 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 AC138473.1-201ENST00000605717 526 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
UBR4Q5T4S7 SETP15-201ENST00000412724 337 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.12□□□□□ -2.23
UBR4Q5T4S7 AC009263.1-201ENST00000441193 1239 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.12□□□□□ -2.23
UBR4Q5T4S7 RPS3AP22-201ENST00000488297 769 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 Y_RNA.654-201ENST00000497848 106 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 DYNLL1P6-201ENST00000503440 264 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 AL356280.1-201ENST00000603614 379 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 SNRPGP19-201ENST00000603826 189 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 AL365503.1-201ENST00000605247 905 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 AC068944.2-201ENST00000610373 403 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 AC008083.4-201ENST00000615076 444 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 AL449363.1-201ENST00000617815 186 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 MIR1197-201ENST00000408818 88 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 ARL5AP3-201ENST00000439327 386 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 AC126182.1-201ENST00000478134 357 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 ALDH7A1P3-201ENST00000492517 345 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 NARSP2-201ENST00000518524 679 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC1.12□□□□□ -2.23
UBR4Q5T4S7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
UBR4Q5T4S7 AC019129.1-201ENST00000403786 261 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 MIR4802-201ENST00000581881 80 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 MIR21-201ENST00000362134 72 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 Z98749.2-208ENST00000381646 500 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 AC127526.1-201ENST00000417526 366 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 YWHAZP7-201ENST00000436906 631 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 AL118520.1-201ENST00000450770 291 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 HMGN1P10-201ENST00000474557 553 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 RNU6-1231P-201ENST00000517185 103 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 AP000857.1-201ENST00000532151 543 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 AC083760.1-201ENST00000589621 670 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 RPS27P27-201ENST00000498779 255 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 AC103858.2-201ENST00000621471 543 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 AC008669.1-201ENST00000565823 2178 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 AL355379.1-201ENST00000405542 640 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 EIF1AXP1-201ENST00000419267 435 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 RN7SL75P-201ENST00000461926 281 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 AC109446.2-201ENST00000567872 497 ntBASIC1.11□□□□□ -2.23
UBR4Q5T4S7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
UBR4Q5T4S7 AC002546.1-201ENST00000588041 2504 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 RNU6-629P-201ENST00000384061 103 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 OR6C64P-201ENST00000419708 825 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 AC096632.1-201ENST00000427395 310 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 AP004217.1-201ENST00000480579 346 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC1.1□□□□□ -2.23
UBR4Q5T4S7 AC105137.2-201ENST00000569073 466 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 AL645939.4-201ENST00000604495 135 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 AC008121.2-201ENST00000614647 523 ntBASIC1.1□□□□□ -2.23
UBR4Q5T4S7 AC093591.3-201ENST00000634516 308 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms