Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC6.45□□□□□ -1.38
VARS2Q5ST30 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.45□□□□□ -1.38
VARS2Q5ST30 MIR4776-2-201ENST00000580204 80 ntBASIC6.45□□□□□ -1.38
VARS2Q5ST30 AC006001.4-201ENST00000622243 395 ntBASIC6.45□□□□□ -1.38
VARS2Q5ST30 AL731532.2-201ENST00000623542 1953 ntBASIC6.45□□□□□ -1.38
VARS2Q5ST30 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.45□□□□□ -1.38
VARS2Q5ST30 AC034229.2-201ENST00000566945 2508 ntBASIC6.45□□□□□ -1.38
VARS2Q5ST30 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VARS2Q5ST30 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
VARS2Q5ST30 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.45□□□□□ -1.38
VARS2Q5ST30 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.45□□□□□ -1.38
VARS2Q5ST30 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARS2Q5ST30 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.44□□□□□ -1.38
VARS2Q5ST30 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARS2Q5ST30 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
VARS2Q5ST30 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.44□□□□□ -1.38
VARS2Q5ST30 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.44□□□□□ -1.38
VARS2Q5ST30 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARS2Q5ST30 AC012254.3-201ENST00000591183 2117 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
VARS2Q5ST30 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARS2Q5ST30 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VARS2Q5ST30 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.44□□□□□ -1.38
VARS2Q5ST30 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VARS2Q5ST30 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
VARS2Q5ST30 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARS2Q5ST30 AC004158.1-201ENST00000564508 4319 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARS2Q5ST30 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
VARS2Q5ST30 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
VARS2Q5ST30 SNORA58B-201ENST00000364259 136 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 Y_RNA.337-201ENST00000365312 102 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 MIR143-201ENST00000385300 106 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 AL391361.1-201ENST00000405580 489 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 NME1P1-201ENST00000420914 382 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 AL035660.1-201ENST00000422041 222 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 LAMTOR3P1-201ENST00000428620 370 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 AL163193.1-201ENST00000444895 788 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 AP006222.1-205ENST00000450734 457 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 RPL23AP3-201ENST00000453844 468 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 DUTP1-201ENST00000493631 470 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 IGKV2-18-201ENST00000522607 343 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.44□□□□□ -1.38
VARS2Q5ST30 NACAP3-201ENST00000552100 481 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC6.44□□□□□ -1.38
VARS2Q5ST30 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC6.44□□□□□ -1.38
VARS2Q5ST30 AC020916.2-201ENST00000591242 360 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 AL136131.3-201ENST00000607600 188 ntBASIC6.44□□□□□ -1.38
VARS2Q5ST30 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC6.44□□□□□ -1.38
VARS2Q5ST30 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.44□□□□□ -1.38
VARS2Q5ST30 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARS2Q5ST30 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARS2Q5ST30 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VARS2Q5ST30 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
VARS2Q5ST30 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VARS2Q5ST30 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARS2Q5ST30 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
VARS2Q5ST30 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VARS2Q5ST30 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.44□□□□□ -1.38
VARS2Q5ST30 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VARS2Q5ST30 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
VARS2Q5ST30 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
VARS2Q5ST30 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.43□□□□□ -1.38
VARS2Q5ST30 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VARS2Q5ST30 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.43□□□□□ -1.38
VARS2Q5ST30 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VARS2Q5ST30 AC007114.2-201ENST00000576014 4281 ntBASIC6.43□□□□□ -1.38
VARS2Q5ST30 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VARS2Q5ST30 AL031119.1-201ENST00000404707 1879 ntBASIC6.43□□□□□ -1.38
VARS2Q5ST30 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.43□□□□□ -1.38
VARS2Q5ST30 AC092692.1-201ENST00000623625 2595 ntBASIC6.43□□□□□ -1.38
VARS2Q5ST30 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VARS2Q5ST30 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.43□□□□□ -1.38
VARS2Q5ST30 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VARS2Q5ST30 AC087516.1-201ENST00000561236 2428 ntBASIC6.43□□□□□ -1.38
VARS2Q5ST30 RNU6-1175P-201ENST00000365200 107 ntBASIC6.43□□□□□ -1.38
VARS2Q5ST30 RN7SKP292-201ENST00000365522 317 ntBASIC6.43□□□□□ -1.38
VARS2Q5ST30 RNU6-741P-201ENST00000383889 107 ntBASIC6.43□□□□□ -1.38
VARS2Q5ST30 RNU4-64P-201ENST00000410795 131 ntBASIC6.43□□□□□ -1.38
VARS2Q5ST30 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.43□□□□□ -1.38
VARS2Q5ST30 RPL36AP39-201ENST00000445859 318 ntBASIC6.43□□□□□ -1.38
VARS2Q5ST30 AL162389.1-201ENST00000449233 177 ntBASIC6.43□□□□□ -1.38
VARS2Q5ST30 AC112187.1-201ENST00000455837 479 ntBASIC6.43□□□□□ -1.38
VARS2Q5ST30 RPL36AP41-201ENST00000493820 306 ntBASIC6.43□□□□□ -1.38
VARS2Q5ST30 HMGB3P16-201ENST00000508037 287 ntBASIC6.43□□□□□ -1.38
VARS2Q5ST30 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC6.43□□□□□ -1.38
VARS2Q5ST30 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC6.43□□□□□ -1.38
VARS2Q5ST30 AC090877.1-201ENST00000561418 344 ntBASIC6.43□□□□□ -1.38
VARS2Q5ST30 AC022968.1-201ENST00000567372 442 ntBASIC6.43□□□□□ -1.38
VARS2Q5ST30 CR381572.2-201ENST00000624852 397 ntBASIC6.43□□□□□ -1.38
VARS2Q5ST30 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
VARS2Q5ST30 TTC41P-205ENST00000551270 3963 ntBASIC6.43□□□□□ -1.38
VARS2Q5ST30 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.43□□□□□ -1.38
VARS2Q5ST30 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VARS2Q5ST30 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
VARS2Q5ST30 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
VARS2Q5ST30 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VARS2Q5ST30 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VARS2Q5ST30 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms