Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.27□□□□□ -1.73
TRIM71Q2Q1W2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM71Q2Q1W2 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM71Q2Q1W2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TRIM71Q2Q1W2 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
TRIM71Q2Q1W2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM71Q2Q1W2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TRIM71Q2Q1W2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM71Q2Q1W2 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 SNORD51-201ENST00000384320 80 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 RN7SKP56-201ENST00000410513 331 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 AC245052.5-201ENST00000416320 649 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 AIMP1P1-201ENST00000418670 937 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 AL035423.1-201ENST00000420331 213 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 RSU1P2-202ENST00000437884 485 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 RPL22P17-201ENST00000438729 315 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 GDI2P2-201ENST00000445131 608 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 PRDX3P3-201ENST00000447765 522 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 AC027673.1-201ENST00000456245 405 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 UBDP1-202ENST00000457888 382 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 AC139783.2-201ENST00000504847 1145 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 RNU6-714P-201ENST00000516963 103 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 IGLV3-26-201ENST00000520756 302 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 ZNF519P2-201ENST00000557032 169 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 AC034268.2-201ENST00000571784 482 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 MIR4528-201ENST00000577763 90 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 MIR5187-201ENST00000583479 76 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 AC055876.5-201ENST00000605667 259 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 HMGB1P50-201ENST00000605814 607 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 RNA5SP108-201ENST00000605921 117 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 HMGN2P28-201ENST00000606102 262 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 RNU1-30P-201ENST00000606575 163 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 AL713922.2-201ENST00000619384 716 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 U6.105-201ENST00000637379 88 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 AC015813.6-201ENST00000624409 5808 ntBASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
TRIM71Q2Q1W2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 AL136964.1-201ENST00000622038 2990 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 RNU6-1249P-201ENST00000363237 111 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 RNU6-533P-201ENST00000384144 107 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 MIR199A2-201ENST00000385289 110 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 PTMAP5-201ENST00000393073 333 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 RPL7AP73-201ENST00000413490 353 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 RPL21P32-201ENST00000419877 477 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 AC006548.1-201ENST00000427470 102 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 MTCO2P19-201ENST00000427513 598 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 AP000907.1-201ENST00000428428 510 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 MTND1P2-201ENST00000430604 821 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 MTND3P21-201ENST00000433774 331 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 FAM103A2P-201ENST00000444122 354 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 USP9YP12-201ENST00000450481 570 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 RPL21P11-201ENST00000461458 483 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 AC106707.2-201ENST00000484182 374 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 RPS26P15-201ENST00000488067 348 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 AC104619.4-201ENST00000510773 249 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 AP002453.2-201ENST00000533503 320 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 RPS3AP4-201ENST00000555161 764 ntBASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM71Q2Q1W2 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms