Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL049838.1-201ENST00000563647 981 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 AC091946.2-201ENST00000606105 291 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 AP001521.1-201ENST00000609150 300 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 AL121895.2-201ENST00000619558 447 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 AC026634.1-201ENST00000634369 198 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 AC090897.3-201ENST00000636973 1157 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 LINC02211-204ENST00000642024 1070 ntBASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHROOM1Q2M3G4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 FTLP6-201ENST00000355274 422 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 RNU5D-1-201ENST00000363299 116 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 SUGT1P1-201ENST00000379514 476 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 SNRPEP2-201ENST00000397592 279 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 MTND4LP20-201ENST00000402379 270 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 VN1R51P-201ENST00000411675 945 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 Z75741.2-201ENST00000417272 1167 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 FNDC3CP-201ENST00000420795 1155 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AC007435.1-201ENST00000421086 415 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AL645937.1-202ENST00000421799 937 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 NUP35P1-201ENST00000422734 947 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AL645638.1-201ENST00000440519 361 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 RPL23AP76-201ENST00000441860 458 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 RPL23AP31-201ENST00000456160 467 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AC005410.1-202ENST00000460347 485 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AC092757.1-201ENST00000467293 467 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 PABPC1P3-201ENST00000469174 459 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 RN7SL442P-201ENST00000473804 320 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 RPL21P131-201ENST00000497298 483 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AC113347.3-201ENST00000509113 148 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 TPT1P8-201ENST00000510120 555 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 ARL2BPP5-201ENST00000523141 481 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 TRAV37-201ENST00000553906 342 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 MTCYBP27-201ENST00000555160 670 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AC023813.2-201ENST00000564321 469 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AC138761.3-201ENST00000579993 334 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 COX6CP3-201ENST00000580869 223 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 MIR3162-201ENST00000581818 82 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 BNIP3P40-201ENST00000596017 556 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AC024153.1-201ENST00000603103 365 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AC008083.4-201ENST00000615076 444 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 PWAR6-201ENST00000552334 4618 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AC109315.1-201ENST00000584143 1347 ntBASIC3.39□□□□□ -1.87
SHROOM1Q2M3G4 AL136360.1-201ENST00000503377 1900 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 RNU1-75P-201ENST00000347264 129 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 SNORA51.6-201ENST00000384151 125 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 RNU6-1242P-201ENST00000391052 103 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AL031679.1-201ENST00000400616 525 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 CYCSP45-201ENST00000402289 315 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 RNA5SP107-201ENST00000411358 122 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 MTCO2P8-201ENST00000412213 658 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 RPS3AP37-201ENST00000419176 745 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 MRPS36P1-201ENST00000421291 307 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 NANOGP5-201ENST00000424456 877 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AL031313.1-201ENST00000448435 256 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 MTND2P19-201ENST00000449129 1012 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 KC877373.1-201ENST00000479066 408 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AC108734.3-201ENST00000481241 1165 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 RPL30P14-201ENST00000482744 348 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AC093767.1-201ENST00000504523 156 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AC008837.2-201ENST00000513076 418 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 RNU6-415P-201ENST00000516252 97 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 SNORA64.4-201ENST00000516632 81 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AC239860.2-201ENST00000525886 270 ntBASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.38□□□□□ -1.87
SHROOM1Q2M3G4 AC008127.2-201ENST00000549925 1075 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms