Protein–RNA interactions for Protein: Q12996

CSTF3, Cleavage stimulation factor subunit 3, humanhuman

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3Q12996 RNY3P10-201ENST00000384764 102 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 RNA5SP424-201ENST00000390988 115 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 AC078974.1-201ENST00000411597 223 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 SEPT2P1-201ENST00000419651 180 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 AL356583.2-201ENST00000426536 280 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.62□□□□□ -1.83
CSTF3Q12996 AC090774.1-201ENST00000435925 246 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 FTH1P1-201ENST00000437933 532 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 HMGB1P12-201ENST00000438594 598 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.62□□□□□ -1.83
CSTF3Q12996 AC073387.1-201ENST00000453261 709 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.62□□□□□ -1.83
CSTF3Q12996 AC068587.1-201ENST00000483613 781 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 AC108860.1-201ENST00000484521 383 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 RPL23AP41-201ENST00000484754 458 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 AC055855.1-201ENST00000489563 579 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.62□□□□□ -1.83
CSTF3Q12996 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CSTF3Q12996 NPM1P41-201ENST00000512920 831 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 SNORA31.8-201ENST00000516327 108 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 Y_RNA.695-201ENST00000516715 107 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 RNA5SP468-201ENST00000516782 93 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 IGKV2D-19-201ENST00000523346 262 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.62□□□□□ -1.83
CSTF3Q12996 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CSTF3Q12996 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.62□□□□□ -1.83
CSTF3Q12996 OR4T1P-201ENST00000554933 911 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 ZNF519P3-201ENST00000557158 1032 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 MED28P6-201ENST00000558776 231 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.62□□□□□ -1.83
CSTF3Q12996 AC006960.3-201ENST00000561845 705 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 COX6CP3-201ENST00000580869 223 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.62□□□□□ -1.83
CSTF3Q12996 AC135507.1-201ENST00000607214 561 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 AC239868.4-201ENST00000608318 671 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 AC104010.1-201ENST00000616889 150 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 AC079684.1-201ENST00000621405 437 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 AL159972.1-201ENST00000625150 448 ntBASIC3.62□□□□□ -1.83
CSTF3Q12996 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.62□□□□□ -1.83
CSTF3Q12996 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CSTF3Q12996 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.62□□□□□ -1.83
CSTF3Q12996 AC005832.2-201ENST00000538921 1430 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.61□□□□□ -1.83
CSTF3Q12996 PRO1804-201ENST00000623780 2050 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CSTF3Q12996 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CSTF3Q12996 PWAR6-201ENST00000552334 4618 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CSTF3Q12996 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.61□□□□□ -1.83
CSTF3Q12996 Y_RNA.77-201ENST00000362962 107 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 RNA5SP283-201ENST00000365604 119 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CSTF3Q12996 DEFB109C-201ENST00000382575 264 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 DEFB109B-201ENST00000382656 264 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 EI24P2-201ENST00000397776 1076 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 RPL7P25-201ENST00000404151 721 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 RNU4-65P-201ENST00000410473 140 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 RNU6-628P-201ENST00000410675 107 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 RN7SKP142-201ENST00000411236 328 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.61□□□□□ -1.83
CSTF3Q12996 HMGN1P24-201ENST00000412282 298 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.61□□□□□ -1.83
CSTF3Q12996 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.61□□□□□ -1.83
CSTF3Q12996 MTATP6P4-201ENST00000427725 675 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.61□□□□□ -1.83
CSTF3Q12996 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.61□□□□□ -1.83
CSTF3Q12996 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.61□□□□□ -1.83
CSTF3Q12996 RPL35AP22-201ENST00000436855 335 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.61□□□□□ -1.83
CSTF3Q12996 RPL21P89-201ENST00000444021 467 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 HMGB3P8-201ENST00000449709 577 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.61□□□□□ -1.83
CSTF3Q12996 AL122001.1-201ENST00000457027 370 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.61□□□□□ -1.83
CSTF3Q12996 OR9M1P-201ENST00000459641 921 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.61□□□□□ -1.83
CSTF3Q12996 AC002456.2-201ENST00000509356 380 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 FABP5P5-201ENST00000515537 406 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 AC022695.1-201ENST00000522089 237 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 AC008489.1-201ENST00000524271 483 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 AP002748.2-201ENST00000528671 348 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.61□□□□□ -1.83
CSTF3Q12996 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.61□□□□□ -1.83
CSTF3Q12996 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.61□□□□□ -1.83
CSTF3Q12996 AC012414.6-201ENST00000568241 401 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.61□□□□□ -1.83
CSTF3Q12996 AL606490.9-201ENST00000603331 271 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 AC004067.1-201ENST00000608733 700 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 AC004908.2-201ENST00000609090 574 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CSTF3Q12996 AC068724.3-201ENST00000625906 87 ntBASIC3.61□□□□□ -1.83
CSTF3Q12996 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.61□□□□□ -1.83
CSTF3Q12996 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.61□□□□□ -1.83
CSTF3Q12996 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CSTF3Q12996 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CSTF3Q12996 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.61□□□□□ -1.83
CSTF3Q12996 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CSTF3Q12996 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms