Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LTBQ06643 Z82217.1-201ENST00000625157 8149 ntBASIC3.66□□□□□ -1.82
LTBQ06643 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LTBQ06643 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LTBQ06643 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.66□□□□□ -1.82
LTBQ06643 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LTBQ06643 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.66□□□□□ -1.82
LTBQ06643 Y_RNA.1-201ENST00000352915 104 ntBASIC3.66□□□□□ -1.82
LTBQ06643 Y_RNA.46-201ENST00000362695 102 ntBASIC3.66□□□□□ -1.82
LTBQ06643 Y_RNA.89-201ENST00000363031 102 ntBASIC3.66□□□□□ -1.82
LTBQ06643 RNU6-534P-201ENST00000364877 106 ntBASIC3.66□□□□□ -1.82
LTBQ06643 Y_RNA.295-201ENST00000364918 102 ntBASIC3.66□□□□□ -1.82
LTBQ06643 RNU6-876P-201ENST00000391295 104 ntBASIC3.66□□□□□ -1.82
LTBQ06643 MTCO1P17-201ENST00000411522 491 ntBASIC3.66□□□□□ -1.82
LTBQ06643 Z92545.1-201ENST00000411782 234 ntBASIC3.66□□□□□ -1.82
LTBQ06643 AL133384.1-201ENST00000412744 351 ntBASIC3.66□□□□□ -1.82
LTBQ06643 RPS3AP9-201ENST00000417027 792 ntBASIC3.66□□□□□ -1.82
LTBQ06643 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.66□□□□□ -1.82
LTBQ06643 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.66□□□□□ -1.82
LTBQ06643 AC011742.1-201ENST00000431448 434 ntBASIC3.66□□□□□ -1.82
LTBQ06643 FCF1P1-201ENST00000432690 571 ntBASIC3.66□□□□□ -1.82
LTBQ06643 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.66□□□□□ -1.82
LTBQ06643 AL356276.2-201ENST00000435919 558 ntBASIC3.66□□□□□ -1.82
LTBQ06643 ARPC3P1-201ENST00000437218 533 ntBASIC3.66□□□□□ -1.82
LTBQ06643 TPT1P14-201ENST00000448018 505 ntBASIC3.66□□□□□ -1.82
LTBQ06643 AMD1P1-201ENST00000457220 922 ntBASIC3.66□□□□□ -1.82
LTBQ06643 AC023598.1-201ENST00000472521 361 ntBASIC3.66□□□□□ -1.82
LTBQ06643 AP000893.1-201ENST00000474462 794 ntBASIC3.66□□□□□ -1.82
LTBQ06643 AC091951.2-201ENST00000500762 203 ntBASIC3.66□□□□□ -1.82
LTBQ06643 HMGB1P21-201ENST00000502313 581 ntBASIC3.66□□□□□ -1.82
LTBQ06643 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.66□□□□□ -1.82
LTBQ06643 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.66□□□□□ -1.82
LTBQ06643 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
LTBQ06643 HSPA8P13-201ENST00000523715 472 ntBASIC3.66□□□□□ -1.82
LTBQ06643 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.66□□□□□ -1.82
LTBQ06643 MTND1P35-201ENST00000526739 508 ntBASIC3.66□□□□□ -1.82
LTBQ06643 AC104383.1-201ENST00000530297 370 ntBASIC3.66□□□□□ -1.82
LTBQ06643 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.66□□□□□ -1.82
LTBQ06643 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.66□□□□□ -1.82
LTBQ06643 HSPE1P5-201ENST00000561489 272 ntBASIC3.66□□□□□ -1.82
LTBQ06643 AC022968.1-201ENST00000567372 442 ntBASIC3.66□□□□□ -1.82
LTBQ06643 MIR5685-201ENST00000579080 79 ntBASIC3.66□□□□□ -1.82
LTBQ06643 AC011471.1-201ENST00000585766 187 ntBASIC3.66□□□□□ -1.82
LTBQ06643 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.66□□□□□ -1.82
LTBQ06643 AL359999.1-201ENST00000604513 294 ntBASIC3.66□□□□□ -1.82
LTBQ06643 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LTBQ06643 AL049634.3-201ENST00000604968 457 ntBASIC3.66□□□□□ -1.82
LTBQ06643 AL365503.1-201ENST00000605247 905 ntBASIC3.66□□□□□ -1.82
LTBQ06643 AC008945.2-201ENST00000606056 604 ntBASIC3.66□□□□□ -1.82
LTBQ06643 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LTBQ06643 Y_RNA.804-201ENST00000615262 101 ntBASIC3.66□□□□□ -1.82
LTBQ06643 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
LTBQ06643 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.66□□□□□ -1.82
LTBQ06643 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
LTBQ06643 AL354685.2-201ENST00000448218 1447 ntBASIC3.66□□□□□ -1.82
LTBQ06643 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LTBQ06643 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.66□□□□□ -1.82
LTBQ06643 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.66□□□□□ -1.82
LTBQ06643 AC073346.2-201ENST00000624724 2058 ntBASIC3.66□□□□□ -1.82
LTBQ06643 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
LTBQ06643 RLIMP1-201ENST00000339626 1680 ntBASIC3.65□□□□□ -1.82
LTBQ06643 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.65□□□□□ -1.82
LTBQ06643 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LTBQ06643 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
LTBQ06643 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
LTBQ06643 LINC02471-203ENST00000641941 4752 ntBASIC3.65□□□□□ -1.83
LTBQ06643 OR5J1P-201ENST00000313544 939 ntBASIC3.65□□□□□ -1.83
LTBQ06643 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LTBQ06643 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LTBQ06643 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
LTBQ06643 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.65□□□□□ -1.83
LTBQ06643 SNORD35B-201ENST00000363660 87 ntBASIC3.65□□□□□ -1.83
LTBQ06643 RNA5SP130-201ENST00000364431 114 ntBASIC3.65□□□□□ -1.83
LTBQ06643 RNU6-1293P-201ENST00000384077 107 ntBASIC3.65□□□□□ -1.83
LTBQ06643 RNU6-483P-201ENST00000384088 108 ntBASIC3.65□□□□□ -1.83
LTBQ06643 RNU11-4P-201ENST00000391149 133 ntBASIC3.65□□□□□ -1.83
LTBQ06643 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
LTBQ06643 AL031679.1-201ENST00000400616 525 ntBASIC3.65□□□□□ -1.83
LTBQ06643 RPL7P25-201ENST00000404151 721 ntBASIC3.65□□□□□ -1.83
LTBQ06643 RNU2-41P-201ENST00000410991 178 ntBASIC3.65□□□□□ -1.83
LTBQ06643 AC108032.1-201ENST00000416706 207 ntBASIC3.65□□□□□ -1.83
LTBQ06643 HMGB3P20-201ENST00000417997 600 ntBASIC3.65□□□□□ -1.83
LTBQ06643 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.65□□□□□ -1.83
LTBQ06643 MTCO2P11-201ENST00000431069 680 ntBASIC3.65□□□□□ -1.83
LTBQ06643 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.65□□□□□ -1.83
LTBQ06643 FAM103A2P-201ENST00000444122 354 ntBASIC3.65□□□□□ -1.83
LTBQ06643 PPIAP15-201ENST00000479662 484 ntBASIC3.65□□□□□ -1.83
LTBQ06643 AC114967.1-201ENST00000504890 259 ntBASIC3.65□□□□□ -1.83
LTBQ06643 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.65□□□□□ -1.83
LTBQ06643 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.65□□□□□ -1.83
LTBQ06643 Y_RNA.672-201ENST00000516289 104 ntBASIC3.65□□□□□ -1.83
LTBQ06643 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.65□□□□□ -1.83
LTBQ06643 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.65□□□□□ -1.83
LTBQ06643 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.65□□□□□ -1.83
LTBQ06643 AC109635.3-201ENST00000529536 185 ntBASIC3.65□□□□□ -1.83
LTBQ06643 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.65□□□□□ -1.83
LTBQ06643 ZNF705CP-201ENST00000530515 889 ntBASIC3.65□□□□□ -1.83
LTBQ06643 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.65□□□□□ -1.83
LTBQ06643 DYNLL1P4-201ENST00000549314 266 ntBASIC3.65□□□□□ -1.83
LTBQ06643 AC107016.1-201ENST00000550463 337 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms