Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC025016.1-201ENST00000616746 682 ntBASIC2.16□□□□□ -2.06
H3F3AP84243 VN1R7P-201ENST00000619242 903 ntBASIC2.16□□□□□ -2.06
H3F3AP84243 AL353748.2-201ENST00000622148 471 ntBASIC2.16□□□□□ -2.06
H3F3AP84243 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
H3F3AP84243 AC087359.1-201ENST00000508335 1740 ntBASIC2.16□□□□□ -2.06
H3F3AP84243 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.16□□□□□ -2.06
H3F3AP84243 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.16□□□□□ -2.06
H3F3AP84243 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.15□□□□□ -2.06
H3F3AP84243 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
H3F3AP84243 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
H3F3AP84243 FTLP6-201ENST00000355274 422 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 U8.8-201ENST00000365399 135 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 RNU6-198P-201ENST00000384258 104 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 MIR649-201ENST00000384843 97 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 RNA5SP354-201ENST00000391247 136 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 UBE2V1P2-201ENST00000397758 440 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 RPS4XP7-201ENST00000406274 780 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 RNU6-193P-201ENST00000410977 107 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 PAICSP7-201ENST00000419829 962 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.15□□□□□ -2.07
H3F3AP84243 RPP40P1-201ENST00000426762 456 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.15□□□□□ -2.07
H3F3AP84243 RNF2P1-201ENST00000442955 1010 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.15□□□□□ -2.07
H3F3AP84243 AC023424.2-201ENST00000493479 777 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 RPS27P26-201ENST00000494583 239 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.15□□□□□ -2.07
H3F3AP84243 AC025768.1-201ENST00000510057 267 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 SNORA70.16-201ENST00000516390 95 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
H3F3AP84243 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.15□□□□□ -2.07
H3F3AP84243 PRELID2P1-201ENST00000552837 301 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.15□□□□□ -2.07
H3F3AP84243 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.15□□□□□ -2.07
H3F3AP84243 AC009097.3-201ENST00000563557 1018 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 AC010546.1-201ENST00000569391 485 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.15□□□□□ -2.07
H3F3AP84243 AC055876.5-201ENST00000605667 259 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 AC026790.2-201ENST00000606282 430 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 AC103810.6-201ENST00000606708 136 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.15□□□□□ -2.07
H3F3AP84243 AC027309.3-201ENST00000623419 351 ntBASIC2.15□□□□□ -2.07
H3F3AP84243 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
H3F3AP84243 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
H3F3AP84243 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
H3F3AP84243 SNORA27.3-201ENST00000364937 134 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
H3F3AP84243 ATF1P1-201ENST00000406040 927 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
H3F3AP84243 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.14□□□□□ -2.07
H3F3AP84243 AC009414.1-201ENST00000427200 443 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.14□□□□□ -2.07
H3F3AP84243 FABP5P3-201ENST00000437960 408 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 RPS15AP7-201ENST00000439294 405 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 HMGN3P1-201ENST00000453847 193 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 AC092798.1-201ENST00000458542 409 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.14□□□□□ -2.07
H3F3AP84243 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.14□□□□□ -2.07
H3F3AP84243 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.14□□□□□ -2.07
H3F3AP84243 AC087808.1-201ENST00000520501 361 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 OR8K4P-201ENST00000534608 872 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
H3F3AP84243 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.14□□□□□ -2.07
H3F3AP84243 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
H3F3AP84243 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
H3F3AP84243 AC090888.1-201ENST00000561335 1141 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.14□□□□□ -2.07
H3F3AP84243 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.14□□□□□ -2.07
H3F3AP84243 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.14□□□□□ -2.07
H3F3AP84243 AC025281.1-201ENST00000567026 265 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 AC061975.8-201ENST00000587058 721 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 RPL23AP92-201ENST00000603609 255 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 AC016542.1-201ENST00000608259 493 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 UCA1.1-201ENST00000620952 75 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
H3F3AP84243 MIR6852-201ENST00000621699 66 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 AC079597.1-201ENST00000624306 508 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 AP003400.6-201ENST00000624698 740 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 AC083865.1-201ENST00000636634 831 ntBASIC2.14□□□□□ -2.07
H3F3AP84243 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.14□□□□□ -2.07
H3F3AP84243 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.14□□□□□ -2.07
H3F3AP84243 MTND5P31-201ENST00000419366 1374 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
H3F3AP84243 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
H3F3AP84243 ANKRD36P1-201ENST00000344424 659 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 MIR21-201ENST00000362134 72 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
H3F3AP84243 SNORA36C-201ENST00000384289 132 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 RNU6-921P-201ENST00000384361 107 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 TAS2R15P-201ENST00000390674 928 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 ATP5F1P6-201ENST00000402768 767 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 RN7SKP140-201ENST00000411196 284 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.13□□□□□ -2.07
H3F3AP84243 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.13□□□□□ -2.07
H3F3AP84243 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.13□□□□□ -2.07
H3F3AP84243 RPL7L1P10-201ENST00000427790 463 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 AC012497.1-201ENST00000429392 575 ntBASIC2.13□□□□□ -2.07
H3F3AP84243 AC092573.2-201ENST00000434546 243 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms