Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.85□□□□□ -2.11
UBA52P62987 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.85□□□□□ -2.11
UBA52P62987 MTATP6P11-201ENST00000428071 670 ntBASIC1.85□□□□□ -2.11
UBA52P62987 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.85□□□□□ -2.11
UBA52P62987 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.85□□□□□ -2.11
UBA52P62987 AL590664.1-201ENST00000448065 339 ntBASIC1.85□□□□□ -2.11
UBA52P62987 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.85□□□□□ -2.11
UBA52P62987 AC008427.1-201ENST00000503102 655 ntBASIC1.85□□□□□ -2.11
UBA52P62987 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.85□□□□□ -2.11
UBA52P62987 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.85□□□□□ -2.11
UBA52P62987 AC011472.4-201ENST00000615848 491 ntBASIC1.85□□□□□ -2.11
UBA52P62987 MIR6864-201ENST00000617935 70 ntBASIC1.85□□□□□ -2.11
UBA52P62987 MIR6766-201ENST00000622641 72 ntBASIC1.85□□□□□ -2.11
UBA52P62987 RPL23AP61-201ENST00000623642 466 ntBASIC1.85□□□□□ -2.11
UBA52P62987 FAM157B-203ENST00000639350 358 ntBASIC1.85□□□□□ -2.11
UBA52P62987 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
UBA52P62987 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
UBA52P62987 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
UBA52P62987 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
UBA52P62987 AL359851.1-201ENST00000569460 4997 ntBASIC1.85□□□□□ -2.11
UBA52P62987 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.84□□□□□ -2.11
UBA52P62987 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
UBA52P62987 AC022031.1-201ENST00000585985 2593 ntBASIC1.84□□□□□ -2.11
UBA52P62987 ZNF72P-201ENST00000425869 1908 ntBASIC1.84□□□□□ -2.11
UBA52P62987 RNA5SP391-201ENST00000363456 119 ntBASIC1.84□□□□□ -2.11
UBA52P62987 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
UBA52P62987 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.84□□□□□ -2.11
UBA52P62987 HMGB1P18-201ENST00000438801 619 ntBASIC1.84□□□□□ -2.11
UBA52P62987 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.84□□□□□ -2.11
UBA52P62987 HMGN1P5-201ENST00000448591 263 ntBASIC1.84□□□□□ -2.11
UBA52P62987 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC1.84□□□□□ -2.11
UBA52P62987 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.84□□□□□ -2.11
UBA52P62987 ACTR6P1-201ENST00000514311 1104 ntBASIC1.84□□□□□ -2.11
UBA52P62987 HSPE1P18-201ENST00000517602 280 ntBASIC1.84□□□□□ -2.11
UBA52P62987 MTCYBP20-201ENST00000524239 1129 ntBASIC1.84□□□□□ -2.11
UBA52P62987 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.84□□□□□ -2.11
UBA52P62987 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
UBA52P62987 MIR5007-201ENST00000583098 95 ntBASIC1.84□□□□□ -2.11
UBA52P62987 AL450472.3-201ENST00000615578 367 ntBASIC1.84□□□□□ -2.11
UBA52P62987 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.84□□□□□ -2.11
UBA52P62987 AC010809.3-201ENST00000621310 641 ntBASIC1.84□□□□□ -2.11
UBA52P62987 DUXAP9-208ENST00000622815 614 ntBASIC1.84□□□□□ -2.11
UBA52P62987 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.84□□□□□ -2.11
UBA52P62987 AC002543.1-201ENST00000299783 1954 ntBASIC1.84□□□□□ -2.11
UBA52P62987 AC092881.1-201ENST00000638218 2733 ntBASIC1.83□□□□□ -2.12
UBA52P62987 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.83□□□□□ -2.12
UBA52P62987 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC1.83□□□□□ -2.12
UBA52P62987 RNA5SP99-201ENST00000364020 114 ntBASIC1.83□□□□□ -2.12
UBA52P62987 RNU6-532P-201ENST00000384318 107 ntBASIC1.83□□□□□ -2.12
UBA52P62987 RNA5SP252-201ENST00000391131 119 ntBASIC1.83□□□□□ -2.12
UBA52P62987 HMGB1P11-201ENST00000413899 637 ntBASIC1.83□□□□□ -2.12
UBA52P62987 OR51AB1P-201ENST00000429046 620 ntBASIC1.83□□□□□ -2.12
UBA52P62987 RPS15AP28-201ENST00000435088 386 ntBASIC1.83□□□□□ -2.12
UBA52P62987 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.83□□□□□ -2.12
UBA52P62987 RPS15AP34-201ENST00000487776 387 ntBASIC1.83□□□□□ -2.12
UBA52P62987 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.83□□□□□ -2.12
UBA52P62987 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.83□□□□□ -2.12
UBA52P62987 RNU6-548P-201ENST00000517083 115 ntBASIC1.83□□□□□ -2.12
UBA52P62987 ATP5F1P5-201ENST00000526403 760 ntBASIC1.83□□□□□ -2.12
UBA52P62987 OR4K7P-201ENST00000580232 945 ntBASIC1.83□□□□□ -2.12
UBA52P62987 MIR4658-201ENST00000584344 65 ntBASIC1.83□□□□□ -2.12
UBA52P62987 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.83□□□□□ -2.12
UBA52P62987 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.83□□□□□ -2.12
UBA52P62987 AC099063.3-201ENST00000642066 185 ntBASIC1.83□□□□□ -2.12
UBA52P62987 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
UBA52P62987 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
UBA52P62987 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
UBA52P62987 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.83□□□□□ -2.12
UBA52P62987 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
UBA52P62987 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
UBA52P62987 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.82□□□□□ -2.12
UBA52P62987 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.82□□□□□ -2.12
UBA52P62987 AL355497.1-201ENST00000406262 551 ntBASIC1.82□□□□□ -2.12
UBA52P62987 HNRNPDP2-201ENST00000406475 478 ntBASIC1.82□□□□□ -2.12
UBA52P62987 SSR1P1-201ENST00000407630 814 ntBASIC1.82□□□□□ -2.12
UBA52P62987 RN7SKP32-201ENST00000410167 303 ntBASIC1.82□□□□□ -2.12
UBA52P62987 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.82□□□□□ -2.12
UBA52P62987 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.82□□□□□ -2.12
UBA52P62987 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.82□□□□□ -2.12
UBA52P62987 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.82□□□□□ -2.12
UBA52P62987 MTND2P8-201ENST00000450555 1025 ntBASIC1.82□□□□□ -2.12
UBA52P62987 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.82□□□□□ -2.12
UBA52P62987 RPL23AP42-201ENST00000471152 471 ntBASIC1.82□□□□□ -2.12
UBA52P62987 TRBV1-201ENST00000476502 284 ntBASIC1.82□□□□□ -2.12
UBA52P62987 AC068587.2-201ENST00000478386 781 ntBASIC1.82□□□□□ -2.12
UBA52P62987 RPS27P21-201ENST00000486977 252 ntBASIC1.82□□□□□ -2.12
UBA52P62987 CCNHP1-201ENST00000513311 678 ntBASIC1.82□□□□□ -2.12
UBA52P62987 RNU6-991P-201ENST00000516168 107 ntBASIC1.82□□□□□ -2.12
UBA52P62987 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.82□□□□□ -2.12
UBA52P62987 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.82□□□□□ -2.12
UBA52P62987 AC126177.3-201ENST00000551839 688 ntBASIC1.82□□□□□ -2.12
UBA52P62987 MTCYBP28-201ENST00000566728 1132 ntBASIC1.82□□□□□ -2.12
UBA52P62987 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.82□□□□□ -2.12
UBA52P62987 AC009314.1-201ENST00000603871 304 ntBASIC1.82□□□□□ -2.12
UBA52P62987 AC015849.6-201ENST00000605454 474 ntBASIC1.82□□□□□ -2.12
UBA52P62987 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.82□□□□□ -2.12
UBA52P62987 AL138880.2-201ENST00000616214 239 ntBASIC1.82□□□□□ -2.12
UBA52P62987 MIR6076-201ENST00000617521 113 ntBASIC1.82□□□□□ -2.12
UBA52P62987 CENPCP1-201ENST00000533085 2578 ntBASIC1.82□□□□□ -2.12
UBA52P62987 Z99496.1-201ENST00000469424 1477 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms