Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 ATP5F1P7-201ENST00000567330 760 ntBASIC1.41□□□□□ -2.18
RPS28P62857 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC1.41□□□□□ -2.18
RPS28P62857 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.41□□□□□ -2.18
RPS28P62857 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.41□□□□□ -2.18
RPS28P62857 NRBF2P1-201ENST00000587407 859 ntBASIC1.41□□□□□ -2.18
RPS28P62857 AC008782.1-201ENST00000603386 430 ntBASIC1.41□□□□□ -2.18
RPS28P62857 AC013244.1-201ENST00000604279 193 ntBASIC1.41□□□□□ -2.18
RPS28P62857 AC104763.3-201ENST00000613765 618 ntBASIC1.41□□□□□ -2.18
RPS28P62857 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC1.41□□□□□ -2.18
RPS28P62857 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
RPS28P62857 ZNF285B-201ENST00000561698 1767 ntBASIC1.41□□□□□ -2.18
RPS28P62857 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.4□□□□□ -2.19
RPS28P62857 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
RPS28P62857 MIR21-201ENST00000362134 72 ntBASIC1.4□□□□□ -2.19
RPS28P62857 RNU1-51P-201ENST00000365345 176 ntBASIC1.4□□□□□ -2.19
RPS28P62857 RNU6-217P-201ENST00000384164 104 ntBASIC1.4□□□□□ -2.19
RPS28P62857 MIR514A1-201ENST00000385133 98 ntBASIC1.4□□□□□ -2.19
RPS28P62857 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
RPS28P62857 AC016769.3-201ENST00000396562 315 ntBASIC1.4□□□□□ -2.19
RPS28P62857 AC019129.1-201ENST00000403786 261 ntBASIC1.4□□□□□ -2.19
RPS28P62857 AL353692.2-201ENST00000407054 335 ntBASIC1.4□□□□□ -2.19
RPS28P62857 MIR1286-201ENST00000408112 78 ntBASIC1.4□□□□□ -2.19
RPS28P62857 OR4K6P-201ENST00000416478 897 ntBASIC1.4□□□□□ -2.19
RPS28P62857 AL158823.1-201ENST00000418441 478 ntBASIC1.4□□□□□ -2.19
RPS28P62857 PGBD4P6-201ENST00000421501 610 ntBASIC1.4□□□□□ -2.19
RPS28P62857 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.4□□□□□ -2.19
RPS28P62857 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.4□□□□□ -2.19
RPS28P62857 MED14P1-201ENST00000430517 648 ntBASIC1.4□□□□□ -2.19
RPS28P62857 AC098826.1-201ENST00000433943 471 ntBASIC1.4□□□□□ -2.19
RPS28P62857 IFNA20P-201ENST00000436840 528 ntBASIC1.4□□□□□ -2.19
RPS28P62857 RPL36AP55-201ENST00000454114 305 ntBASIC1.4□□□□□ -2.19
RPS28P62857 HMGB1P36-201ENST00000487709 576 ntBASIC1.4□□□□□ -2.19
RPS28P62857 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC1.4□□□□□ -2.19
RPS28P62857 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC1.4□□□□□ -2.19
RPS28P62857 AK6-204ENST00000512561 587 ntTSL 5 BASIC1.4□□□□□ -2.19
RPS28P62857 MRPS5P3-201ENST00000515577 166 ntBASIC1.4□□□□□ -2.19
RPS28P62857 SCARNA15.2-201ENST00000516409 127 ntBASIC1.4□□□□□ -2.19
RPS28P62857 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC1.4□□□□□ -2.19
RPS28P62857 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RPS28P62857 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RPS28P62857 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC1.4□□□□□ -2.19
RPS28P62857 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC1.4□□□□□ -2.19
RPS28P62857 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.4□□□□□ -2.19
RPS28P62857 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RPS28P62857 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.4□□□□□ -2.19
RPS28P62857 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.4□□□□□ -2.19
RPS28P62857 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.4□□□□□ -2.19
RPS28P62857 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC1.4□□□□□ -2.19
RPS28P62857 RN7SL703P-201ENST00000578485 302 ntBASIC1.4□□□□□ -2.19
RPS28P62857 OR4K8P-201ENST00000578842 1048 ntBASIC1.4□□□□□ -2.19
RPS28P62857 MIR5187-201ENST00000583479 76 ntBASIC1.4□□□□□ -2.19
RPS28P62857 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.4□□□□□ -2.19
RPS28P62857 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC1.4□□□□□ -2.19
RPS28P62857 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.4□□□□□ -2.19
RPS28P62857 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC1.4□□□□□ -2.19
RPS28P62857 AC015802.5-201ENST00000607478 399 ntBASIC1.4□□□□□ -2.19
RPS28P62857 AC092954.1-201ENST00000609121 445 ntBASIC1.4□□□□□ -2.19
RPS28P62857 AL589743.7-201ENST00000612637 233 ntBASIC1.4□□□□□ -2.19
RPS28P62857 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.4□□□□□ -2.19
RPS28P62857 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
RPS28P62857 MIR6130-201ENST00000619419 109 ntBASIC1.4□□□□□ -2.19
RPS28P62857 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.4□□□□□ -2.19
RPS28P62857 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
RPS28P62857 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RPS28P62857 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
RPS28P62857 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC1.39□□□□□ -2.19
RPS28P62857 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
RPS28P62857 RNA5SP191-201ENST00000362585 102 ntBASIC1.39□□□□□ -2.19
RPS28P62857 RNA5SP27-201ENST00000363839 119 ntBASIC1.39□□□□□ -2.19
RPS28P62857 RNU4-4P-201ENST00000364588 130 ntBASIC1.39□□□□□ -2.19
RPS28P62857 SNORA23-201ENST00000365128 182 ntBASIC1.39□□□□□ -2.19
RPS28P62857 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RPS28P62857 COX6B1P1-201ENST00000415962 213 ntBASIC1.39□□□□□ -2.19
RPS28P62857 AC244636.1-201ENST00000421152 228 ntBASIC1.39□□□□□ -2.19
RPS28P62857 PTP4A1P7-201ENST00000423476 514 ntBASIC1.39□□□□□ -2.19
RPS28P62857 RPS3AP44-201ENST00000425466 790 ntBASIC1.39□□□□□ -2.19
RPS28P62857 BNIP3P2-201ENST00000441221 577 ntBASIC1.39□□□□□ -2.19
RPS28P62857 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.39□□□□□ -2.19
RPS28P62857 PIGFP3-201ENST00000441918 722 ntBASIC1.39□□□□□ -2.19
RPS28P62857 TRY2P-201ENST00000448860 689 ntBASIC1.39□□□□□ -2.19
RPS28P62857 AC104978.1-201ENST00000449387 391 ntBASIC1.39□□□□□ -2.19
RPS28P62857 RPS27AP2-201ENST00000457576 465 ntBASIC1.39□□□□□ -2.19
RPS28P62857 RNU1-98P-201ENST00000458992 160 ntBASIC1.39□□□□□ -2.19
RPS28P62857 RPL7P49-201ENST00000471402 708 ntBASIC1.39□□□□□ -2.19
RPS28P62857 AC004263.1-201ENST00000479327 332 ntBASIC1.39□□□□□ -2.19
RPS28P62857 AC109486.1-201ENST00000486833 374 ntBASIC1.39□□□□□ -2.19
RPS28P62857 AC072052.1-201ENST00000496556 306 ntBASIC1.39□□□□□ -2.19
RPS28P62857 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.39□□□□□ -2.19
RPS28P62857 AC021678.1-201ENST00000505195 936 ntBASIC1.39□□□□□ -2.19
RPS28P62857 AF213884.2-201ENST00000510417 903 ntBASIC1.39□□□□□ -2.19
RPS28P62857 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.39□□□□□ -2.19
RPS28P62857 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.39□□□□□ -2.19
RPS28P62857 CBX3P4-201ENST00000538909 354 ntBASIC1.39□□□□□ -2.19
RPS28P62857 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC1.39□□□□□ -2.19
RPS28P62857 AC008033.2-201ENST00000542626 177 ntBASIC1.39□□□□□ -2.19
RPS28P62857 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.39□□□□□ -2.19
RPS28P62857 AC007954.1-201ENST00000554198 494 ntBASIC1.39□□□□□ -2.19
RPS28P62857 MTCYBP23-201ENST00000558717 1102 ntBASIC1.39□□□□□ -2.19
RPS28P62857 MIR4286-201ENST00000580651 93 ntBASIC1.39□□□□□ -2.19
RPS28P62857 MIR4285-201ENST00000581001 85 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms