Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.72□□□□□ -2.13
CKS1BP61024 AL162578.1-201ENST00000406202 378 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 RN7SKP27-201ENST00000410684 333 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 AL030996.1-201ENST00000411430 235 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC1.72□□□□□ -2.13
CKS1BP61024 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.72□□□□□ -2.13
CKS1BP61024 ZNF90P2-204ENST00000419323 1075 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 AL139413.1-201ENST00000421309 217 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.72□□□□□ -2.13
CKS1BP61024 FO393419.3-201ENST00000428741 282 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.72□□□□□ -2.13
CKS1BP61024 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.72□□□□□ -2.13
CKS1BP61024 RPS24P13-201ENST00000442520 397 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.72□□□□□ -2.13
CKS1BP61024 AC104978.1-201ENST00000449387 391 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 RNU6-420P-201ENST00000458780 107 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 RPL7P49-201ENST00000471402 708 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.72□□□□□ -2.13
CKS1BP61024 AC010374.2-201ENST00000512933 535 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 CKS1BP7-201ENST00000522230 235 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 AC135628.1-201ENST00000568867 534 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 AC012669.1-201ENST00000603209 283 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 AL355877.2-201ENST00000603670 358 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 AL627230.6-201ENST00000611129 280 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 ATP5A1P2-202ENST00000616464 443 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CKS1BP61024 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CKS1BP61024 AL354685.2-201ENST00000448218 1447 ntBASIC1.72□□□□□ -2.13
CKS1BP61024 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CKS1BP61024 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
CKS1BP61024 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CKS1BP61024 SNORD62.1-201ENST00000362541 86 ntBASIC1.71□□□□□ -2.14
CKS1BP61024 RNU6-270P-201ENST00000364131 105 ntBASIC1.71□□□□□ -2.14
CKS1BP61024 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CKS1BP61024 AL356967.1-201ENST00000406305 431 ntBASIC1.71□□□□□ -2.14
CKS1BP61024 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.71□□□□□ -2.14
CKS1BP61024 RPLP0P7-201ENST00000416050 667 ntBASIC1.71□□□□□ -2.14
CKS1BP61024 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.71□□□□□ -2.14
CKS1BP61024 AC008280.1-201ENST00000418851 412 ntBASIC1.71□□□□□ -2.14
CKS1BP61024 MTCO2P17-201ENST00000424336 677 ntBASIC1.71□□□□□ -2.14
CKS1BP61024 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.71□□□□□ -2.14
CKS1BP61024 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.71□□□□□ -2.14
CKS1BP61024 CACYBPP2-201ENST00000453625 678 ntBASIC1.71□□□□□ -2.14
CKS1BP61024 BX510359.1-201ENST00000456973 237 ntBASIC1.71□□□□□ -2.14
CKS1BP61024 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.71□□□□□ -2.14
CKS1BP61024 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.71□□□□□ -2.14
CKS1BP61024 RPL23AP49-201ENST00000492925 468 ntBASIC1.71□□□□□ -2.14
CKS1BP61024 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.71□□□□□ -2.14
CKS1BP61024 AC026427.2-201ENST00000506228 536 ntBASIC1.71□□□□□ -2.14
CKS1BP61024 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
CKS1BP61024 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.71□□□□□ -2.14
CKS1BP61024 AC096725.1-201ENST00000514266 313 ntBASIC1.71□□□□□ -2.14
CKS1BP61024 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.71□□□□□ -2.14
CKS1BP61024 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.71□□□□□ -2.14
CKS1BP61024 AC022616.2-201ENST00000523185 300 ntBASIC1.71□□□□□ -2.14
CKS1BP61024 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.71□□□□□ -2.14
CKS1BP61024 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.71□□□□□ -2.14
CKS1BP61024 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.71□□□□□ -2.14
CKS1BP61024 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.71□□□□□ -2.14
CKS1BP61024 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.71□□□□□ -2.14
CKS1BP61024 AC012254.4-201ENST00000588843 273 ntBASIC1.71□□□□□ -2.14
CKS1BP61024 AC120053.1-201ENST00000607706 736 ntBASIC1.71□□□□□ -2.14
CKS1BP61024 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CKS1BP61024 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.71□□□□□ -2.14
CKS1BP61024 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.71□□□□□ -2.14
CKS1BP61024 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CKS1BP61024 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.71□□□□□ -2.14
CKS1BP61024 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CKS1BP61024 RNU4-23P-201ENST00000362839 140 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.7□□□□□ -2.14
CKS1BP61024 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.7□□□□□ -2.14
CKS1BP61024 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
CKS1BP61024 MIR670-201ENST00000390142 98 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CKS1BP61024 SNORA11B-201ENST00000408175 129 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.7□□□□□ -2.14
CKS1BP61024 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.7□□□□□ -2.14
CKS1BP61024 GTF2IP20-201ENST00000431663 360 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 AC098826.1-201ENST00000433943 471 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC1.7□□□□□ -2.14
CKS1BP61024 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.7□□□□□ -2.14
CKS1BP61024 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.7□□□□□ -2.14
CKS1BP61024 EEF1B2P7-201ENST00000451177 676 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.7□□□□□ -2.14
CKS1BP61024 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.7□□□□□ -2.14
CKS1BP61024 FTH1P2-201ENST00000466086 412 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 AC055731.1-201ENST00000474387 401 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 PCNAP1-201ENST00000505363 709 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.7□□□□□ -2.14
CKS1BP61024 AC022447.3-201ENST00000506865 495 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.7□□□□□ -2.14
CKS1BP61024 MRPS17P9-201ENST00000511924 393 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 RNU2-44P-201ENST00000516795 194 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 SCARNA11.3-201ENST00000517276 130 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.7□□□□□ -2.14
CKS1BP61024 CKS1BP1-201ENST00000555221 240 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.7□□□□□ -2.14
CKS1BP61024 AC025165.5-201ENST00000602802 578 ntBASIC1.7□□□□□ -2.14
CKS1BP61024 AL109918.3-201ENST00000603072 338 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms