Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH11P55287 AC034268.2-201ENST00000571784 482 ntBASIC3.36□□□□□ -1.87
CDH11P55287 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH11P55287 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH11P55287 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.36□□□□□ -1.87
CDH11P55287 AC090616.5-202ENST00000582111 297 ntBASIC3.36□□□□□ -1.87
CDH11P55287 AC091965.4-201ENST00000607691 587 ntBASIC3.36□□□□□ -1.87
CDH11P55287 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH11P55287 AC138749.5-201ENST00000611461 208 ntBASIC3.36□□□□□ -1.87
CDH11P55287 AC116165.2-201ENST00000616705 206 ntBASIC3.36□□□□□ -1.87
CDH11P55287 AC092140.2-201ENST00000618027 521 ntBASIC3.36□□□□□ -1.87
CDH11P55287 U73479.1-201ENST00000618062 168 ntBASIC3.36□□□□□ -1.87
CDH11P55287 AC018755.4-201ENST00000619715 454 ntBASIC3.36□□□□□ -1.87
CDH11P55287 AC002550.2-201ENST00000621246 394 ntBASIC3.36□□□□□ -1.87
CDH11P55287 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH11P55287 U6.98-201ENST00000637157 84 ntBASIC3.36□□□□□ -1.87
CDH11P55287 CRYM-AS1-204ENST00000637983 556 ntBASIC3.36□□□□□ -1.87
CDH11P55287 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDH11P55287 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CDH11P55287 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH11P55287 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH11P55287 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH11P55287 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH11P55287 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.35□□□□□ -1.87
CDH11P55287 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.35□□□□□ -1.87
CDH11P55287 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDH11P55287 RNU6-1249P-201ENST00000363237 111 ntBASIC3.35□□□□□ -1.87
CDH11P55287 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH11P55287 RNU6-629P-201ENST00000384061 103 ntBASIC3.35□□□□□ -1.87
CDH11P55287 MIR184-201ENST00000384962 84 ntBASIC3.35□□□□□ -1.87
CDH11P55287 RNA5SP424-201ENST00000390988 115 ntBASIC3.35□□□□□ -1.87
CDH11P55287 RNU6-837P-201ENST00000391056 108 ntBASIC3.35□□□□□ -1.87
CDH11P55287 RNU6-712P-201ENST00000410558 100 ntBASIC3.35□□□□□ -1.87
CDH11P55287 RNU2-47P-201ENST00000410649 186 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH11P55287 AIMP1P1-201ENST00000418670 937 ntBASIC3.35□□□□□ -1.87
CDH11P55287 MTCO2P34-201ENST00000421994 607 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AL139247.1-201ENST00000422768 325 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AL356583.2-201ENST00000426536 280 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH11P55287 GOT2P5-201ENST00000433995 546 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH11P55287 NDUFB1P1-201ENST00000435191 180 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH11P55287 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.35□□□□□ -1.87
CDH11P55287 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH11P55287 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH11P55287 MTCO2P7-201ENST00000446518 666 ntBASIC3.35□□□□□ -1.87
CDH11P55287 Z82190.1-201ENST00000454534 490 ntBASIC3.35□□□□□ -1.87
CDH11P55287 RNU6-956P-201ENST00000458868 103 ntBASIC3.35□□□□□ -1.87
CDH11P55287 snoU13.8-201ENST00000458890 104 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AC004801.2-202ENST00000463559 283 ntBASIC3.35□□□□□ -1.87
CDH11P55287 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDH11P55287 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH11P55287 MTCO3P7-201ENST00000510008 774 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDH11P55287 Y_RNA.655-201ENST00000515919 96 ntBASIC3.35□□□□□ -1.87
CDH11P55287 PAICSP4-201ENST00000517543 1253 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AC022695.1-201ENST00000522089 237 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AP000873.5-201ENST00000533906 236 ntBASIC3.35□□□□□ -1.87
CDH11P55287 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH11P55287 MIR3186-201ENST00000577404 85 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.35□□□□□ -1.87
CDH11P55287 BNIP3P22-201ENST00000593399 556 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AC055876.5-201ENST00000605667 259 ntBASIC3.35□□□□□ -1.87
CDH11P55287 SNORA62.6-201ENST00000606322 83 ntBASIC3.35□□□□□ -1.87
CDH11P55287 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AC084782.3-201ENST00000612282 578 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AL592295.2-201ENST00000612578 206 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AL121772.2-201ENST00000614331 297 ntBASIC3.35□□□□□ -1.87
CDH11P55287 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AC012150.2-201ENST00000621300 544 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AL356585.4-201ENST00000623078 1229 ntBASIC3.35□□□□□ -1.87
CDH11P55287 AC092656.1-203ENST00000624134 423 ntBASIC3.35□□□□□ -1.87
CDH11P55287 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH11P55287 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH11P55287 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH11P55287 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH11P55287 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.35□□□□□ -1.87
CDH11P55287 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
CDH11P55287 OTUD4P1-201ENST00000237841 3067 ntBASIC3.35□□□□□ -1.87
CDH11P55287 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDH11P55287 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDH11P55287 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDH11P55287 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CDH11P55287 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDH11P55287 RNY4P24-201ENST00000362735 96 ntBASIC3.34□□□□□ -1.87
CDH11P55287 RNU6-623P-201ENST00000363143 105 ntBASIC3.34□□□□□ -1.87
CDH11P55287 RNU6-853P-201ENST00000364306 107 ntBASIC3.34□□□□□ -1.87
CDH11P55287 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CDH11P55287 EI24P2-201ENST00000397776 1076 ntBASIC3.34□□□□□ -1.87
CDH11P55287 RPS20P2-201ENST00000402520 389 ntBASIC3.34□□□□□ -1.87
CDH11P55287 AC078974.1-201ENST00000411597 223 ntBASIC3.34□□□□□ -1.87
CDH11P55287 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH11P55287 CDK8P2-201ENST00000415020 547 ntBASIC3.34□□□□□ -1.87
CDH11P55287 AC069157.1-201ENST00000421749 137 ntBASIC3.34□□□□□ -1.87
CDH11P55287 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH11P55287 AC092832.1-201ENST00000422934 400 ntBASIC3.34□□□□□ -1.87
CDH11P55287 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.34□□□□□ -1.87
CDH11P55287 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 646.6 ms