Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.56□□□□□ -1.84
LIMK1P53667 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.56□□□□□ -1.84
LIMK1P53667 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.56□□□□□ -1.84
LIMK1P53667 AL121871.1-201ENST00000443413 436 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 RPS29P31-201ENST00000446147 164 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 AL353691.1-201ENST00000451332 387 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.56□□□□□ -1.84
LIMK1P53667 AC011825.1-201ENST00000484967 388 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.56□□□□□ -1.84
LIMK1P53667 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.56□□□□□ -1.84
LIMK1P53667 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.56□□□□□ -1.84
LIMK1P53667 MTND5P4-201ENST00000514978 288 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 SNORA31.1-201ENST00000515993 133 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 RNA5SP216-201ENST00000516111 123 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 SNORA31.5-201ENST00000516190 133 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.56□□□□□ -1.84
LIMK1P53667 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.56□□□□□ -1.84
LIMK1P53667 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.56□□□□□ -1.84
LIMK1P53667 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.56□□□□□ -1.84
LIMK1P53667 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.56□□□□□ -1.84
LIMK1P53667 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.56□□□□□ -1.84
LIMK1P53667 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 AL356596.1-201ENST00000624230 379 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 AP000553.6-201ENST00000641242 118 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.56□□□□□ -1.84
LIMK1P53667 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
LIMK1P53667 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LIMK1P53667 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LIMK1P53667 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
LIMK1P53667 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LIMK1P53667 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
LIMK1P53667 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
LIMK1P53667 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LIMK1P53667 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.55□□□□□ -1.84
LIMK1P53667 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
LIMK1P53667 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
LIMK1P53667 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.55□□□□□ -1.84
LIMK1P53667 SRP72P2-201ENST00000344851 1979 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
LIMK1P53667 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.55□□□□□ -1.84
LIMK1P53667 AL161781.1-201ENST00000354277 403 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 RNU6-1200P-201ENST00000384162 107 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 HLFP1-201ENST00000402375 499 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 AL391417.1-201ENST00000404100 426 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.55□□□□□ -1.84
LIMK1P53667 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.55□□□□□ -1.84
LIMK1P53667 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.55□□□□□ -1.84
LIMK1P53667 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.55□□□□□ -1.84
LIMK1P53667 AL035407.1-201ENST00000429211 571 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.55□□□□□ -1.84
LIMK1P53667 AL008629.1-201ENST00000438615 184 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.55□□□□□ -1.84
LIMK1P53667 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.55□□□□□ -1.84
LIMK1P53667 AC104563.1-201ENST00000476147 376 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 AC097462.2-201ENST00000504623 481 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 AC118282.1-201ENST00000506408 765 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.55□□□□□ -1.84
LIMK1P53667 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.55□□□□□ -1.84
LIMK1P53667 AC024589.1-201ENST00000512207 263 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 UBTFL10-201ENST00000528532 562 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 LRRC34P1-201ENST00000542742 915 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.55□□□□□ -1.84
LIMK1P53667 AC090888.2-201ENST00000559765 1144 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 AC090877.1-201ENST00000561418 344 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 AL845331.3-202ENST00000562856 261 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 MIR5004-201ENST00000579078 107 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 MIR4999-201ENST00000585029 91 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.55□□□□□ -1.84
LIMK1P53667 AL133507.1-201ENST00000605269 557 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 TUG1_1.1-201ENST00000610654 145 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 AL596245.1-201ENST00000618994 362 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 AL445264.1-201ENST00000621719 171 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.55□□□□□ -1.84
LIMK1P53667 CUL1P1-201ENST00000509510 2425 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
LIMK1P53667 AL355596.1-201ENST00000565399 3996 ntBASIC3.55□□□□□ -1.84
LIMK1P53667 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LIMK1P53667 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LIMK1P53667 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LIMK1P53667 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
LIMK1P53667 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
LIMK1P53667 RNU4-35P-201ENST00000362588 141 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 RNU6-462P-201ENST00000362659 105 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 UBE2V1P2-201ENST00000397758 440 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 PIGPP2-201ENST00000411569 458 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.54□□□□□ -1.84
LIMK1P53667 HSFY4P-201ENST00000415994 1181 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.54□□□□□ -1.84
LIMK1P53667 UBE2D3P2-201ENST00000424409 445 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 AC079780.1-201ENST00000428259 207 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.54□□□□□ -1.84
LIMK1P53667 RPS17P13-201ENST00000448974 407 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.54□□□□□ -1.84
LIMK1P53667 AC234775.1-201ENST00000454247 670 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.54□□□□□ -1.84
LIMK1P53667 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.54□□□□□ -1.84
LIMK1P53667 LINC00888-204ENST00000487386 421 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 AC093278.1-201ENST00000494700 600 ntBASIC3.54□□□□□ -1.84
LIMK1P53667 PCBP2P3-201ENST00000509726 843 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms