Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
COPAP53621 RNU6-1181P-201ENST00000384191 106 ntBASIC4.2□□□□□ -1.74
COPAP53621 RPS3AP36-201ENST00000398190 775 ntBASIC4.2□□□□□ -1.74
COPAP53621 AL161631.1-201ENST00000417933 486 ntBASIC4.2□□□□□ -1.74
COPAP53621 AL137014.1-201ENST00000420490 1226 ntBASIC4.2□□□□□ -1.74
COPAP53621 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.2□□□□□ -1.74
COPAP53621 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.2□□□□□ -1.74
COPAP53621 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.2□□□□□ -1.74
COPAP53621 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.2□□□□□ -1.74
COPAP53621 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.2□□□□□ -1.74
COPAP53621 RPS3AP17-201ENST00000472594 777 ntBASIC4.2□□□□□ -1.74
COPAP53621 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.2□□□□□ -1.74
COPAP53621 AC105252.1-201ENST00000503089 286 ntBASIC4.2□□□□□ -1.74
COPAP53621 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.2□□□□□ -1.74
COPAP53621 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.2□□□□□ -1.74
COPAP53621 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.2□□□□□ -1.74
COPAP53621 RNU6-430P-201ENST00000517078 107 ntBASIC4.2□□□□□ -1.74
COPAP53621 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
COPAP53621 AP003181.2-201ENST00000528941 181 ntBASIC4.2□□□□□ -1.74
COPAP53621 DEFB108A-201ENST00000530110 222 ntBASIC4.2□□□□□ -1.74
COPAP53621 AP003122.4-201ENST00000530980 758 ntBASIC4.2□□□□□ -1.74
COPAP53621 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
COPAP53621 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.2□□□□□ -1.74
COPAP53621 AL356432.3-201ENST00000568952 465 ntBASIC4.2□□□□□ -1.74
COPAP53621 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.2□□□□□ -1.74
COPAP53621 AL022154.1-201ENST00000604698 785 ntBASIC4.2□□□□□ -1.74
COPAP53621 AC245389.1-201ENST00000605141 529 ntBASIC4.2□□□□□ -1.74
COPAP53621 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.2□□□□□ -1.74
COPAP53621 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.2□□□□□ -1.74
COPAP53621 AL355472.4-201ENST00000610233 626 ntBASIC4.2□□□□□ -1.74
COPAP53621 AC138649.3-201ENST00000622154 254 ntBASIC4.2□□□□□ -1.74
COPAP53621 AC112204.3-201ENST00000623822 332 ntBASIC4.2□□□□□ -1.74
COPAP53621 AL160394.1-201ENST00000624765 724 ntBASIC4.2□□□□□ -1.74
COPAP53621 SEPT14P19-203ENST00000633205 211 ntBASIC4.2□□□□□ -1.74
COPAP53621 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.2□□□□□ -1.74
COPAP53621 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COPAP53621 MTCO1P9-201ENST00000505577 1534 ntBASIC4.2□□□□□ -1.74
COPAP53621 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COPAP53621 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COPAP53621 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COPAP53621 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
COPAP53621 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.19□□□□□ -1.74
COPAP53621 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COPAP53621 GNG5P1-201ENST00000255500 204 ntBASIC4.19□□□□□ -1.74
COPAP53621 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
COPAP53621 RNU6-1078P-201ENST00000364522 103 ntBASIC4.19□□□□□ -1.74
COPAP53621 MIR23B-201ENST00000384832 97 ntBASIC4.19□□□□□ -1.74
COPAP53621 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.19□□□□□ -1.74
COPAP53621 RN7SKP202-201ENST00000410439 330 ntBASIC4.19□□□□□ -1.74
COPAP53621 RNU2-71P-201ENST00000411395 189 ntBASIC4.19□□□□□ -1.74
COPAP53621 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.19□□□□□ -1.74
COPAP53621 RAD23BP2-201ENST00000416003 1207 ntBASIC4.19□□□□□ -1.74
COPAP53621 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.19□□□□□ -1.74
COPAP53621 ARPC3P1-201ENST00000437218 533 ntBASIC4.19□□□□□ -1.74
COPAP53621 RPL7P28-201ENST00000437739 740 ntBASIC4.19□□□□□ -1.74
COPAP53621 RPS29P7-201ENST00000439662 171 ntBASIC4.19□□□□□ -1.74
COPAP53621 AL049734.2-201ENST00000441066 616 ntBASIC4.19□□□□□ -1.74
COPAP53621 GAPDHP17-201ENST00000449858 1001 ntBASIC4.19□□□□□ -1.74
COPAP53621 MTND1P9-201ENST00000453775 944 ntBASIC4.19□□□□□ -1.74
COPAP53621 AC234775.1-201ENST00000454247 670 ntBASIC4.19□□□□□ -1.74
COPAP53621 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.19□□□□□ -1.74
COPAP53621 RN7SL542P-201ENST00000467147 294 ntBASIC4.19□□□□□ -1.74
COPAP53621 VN1R17P-201ENST00000472048 1090 ntBASIC4.19□□□□□ -1.74
COPAP53621 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
COPAP53621 RN7SL132P-201ENST00000478131 296 ntBASIC4.19□□□□□ -1.74
COPAP53621 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
COPAP53621 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
COPAP53621 Y_RNA.672-201ENST00000516289 104 ntBASIC4.19□□□□□ -1.74
COPAP53621 MTCO2P4-201ENST00000517968 247 ntBASIC4.19□□□□□ -1.74
COPAP53621 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.19□□□□□ -1.74
COPAP53621 NRBF2P1-201ENST00000587407 859 ntBASIC4.19□□□□□ -1.74
COPAP53621 AL161729.4-201ENST00000604650 476 ntBASIC4.19□□□□□ -1.74
COPAP53621 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.19□□□□□ -1.74
COPAP53621 TUG1_1.1-201ENST00000610654 145 ntBASIC4.19□□□□□ -1.74
COPAP53621 AC012150.2-201ENST00000621300 544 ntBASIC4.19□□□□□ -1.74
COPAP53621 PISRT1-201ENST00000626175 531 ntBASIC4.19□□□□□ -1.74
COPAP53621 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
COPAP53621 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COPAP53621 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.19□□□□□ -1.74
COPAP53621 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COPAP53621 AC116667.1-201ENST00000604855 2072 ntBASIC4.18□□□□□ -1.74
COPAP53621 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COPAP53621 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
COPAP53621 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COPAP53621 RNU6-600P-201ENST00000362524 99 ntBASIC4.18□□□□□ -1.74
COPAP53621 RNU2-8P-201ENST00000410727 190 ntBASIC4.18□□□□□ -1.74
COPAP53621 CYCSP19-201ENST00000411715 316 ntBASIC4.18□□□□□ -1.74
COPAP53621 AC233728.2-201ENST00000425348 757 ntBASIC4.18□□□□□ -1.74
COPAP53621 OR4K11P-201ENST00000431829 904 ntBASIC4.18□□□□□ -1.74
COPAP53621 RAC1P7-201ENST00000445367 377 ntBASIC4.18□□□□□ -1.74
COPAP53621 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.18□□□□□ -1.74
COPAP53621 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.18□□□□□ -1.74
COPAP53621 AC055855.1-201ENST00000489563 579 ntBASIC4.18□□□□□ -1.74
COPAP53621 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.18□□□□□ -1.74
COPAP53621 RNU6-1095P-201ENST00000516148 108 ntBASIC4.18□□□□□ -1.74
COPAP53621 RNU6-506P-201ENST00000516553 94 ntBASIC4.18□□□□□ -1.74
COPAP53621 RNU6-798P-201ENST00000516912 103 ntBASIC4.18□□□□□ -1.74
COPAP53621 RNU2-46P-201ENST00000517038 113 ntBASIC4.18□□□□□ -1.74
COPAP53621 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
COPAP53621 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms