Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.14□□□□□ -1.75
COPB1P53618 AC114967.1-201ENST00000504890 259 ntBASIC4.14□□□□□ -1.75
COPB1P53618 HMGB1P29-201ENST00000505659 499 ntBASIC4.14□□□□□ -1.75
COPB1P53618 ARL2BPP6-201ENST00000512757 439 ntBASIC4.14□□□□□ -1.75
COPB1P53618 AC093853.1-201ENST00000515689 483 ntBASIC4.14□□□□□ -1.75
COPB1P53618 RNA5SP315-201ENST00000516340 116 ntBASIC4.14□□□□□ -1.75
COPB1P53618 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.14□□□□□ -1.75
COPB1P53618 RNA5SP312-201ENST00000517068 116 ntBASIC4.14□□□□□ -1.75
COPB1P53618 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.14□□□□□ -1.75
COPB1P53618 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.14□□□□□ -1.75
COPB1P53618 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.14□□□□□ -1.75
COPB1P53618 AP005205.1-201ENST00000563503 508 ntBASIC4.14□□□□□ -1.75
COPB1P53618 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.14□□□□□ -1.75
COPB1P53618 AC034268.2-201ENST00000571784 482 ntBASIC4.14□□□□□ -1.75
COPB1P53618 AC053481.3-201ENST00000577881 843 ntBASIC4.14□□□□□ -1.75
COPB1P53618 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.14□□□□□ -1.75
COPB1P53618 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.14□□□□□ -1.75
COPB1P53618 RNU6-87P-201ENST00000607561 108 ntBASIC4.14□□□□□ -1.75
COPB1P53618 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.14□□□□□ -1.75
COPB1P53618 AC093908.1-201ENST00000623125 8092 ntBASIC4.14□□□□□ -1.75
COPB1P53618 AC112484.5-201ENST00000624189 228 ntBASIC4.14□□□□□ -1.75
COPB1P53618 MIR6863-201ENST00000636112 90 ntBASIC4.14□□□□□ -1.75
COPB1P53618 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
COPB1P53618 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.14□□□□□ -1.75
COPB1P53618 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
COPB1P53618 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COPB1P53618 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
COPB1P53618 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COPB1P53618 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
COPB1P53618 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COPB1P53618 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.13□□□□□ -1.75
COPB1P53618 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COPB1P53618 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.13□□□□□ -1.75
COPB1P53618 GNG5P1-201ENST00000255500 204 ntBASIC4.13□□□□□ -1.75
COPB1P53618 AL161781.1-201ENST00000354277 403 ntBASIC4.13□□□□□ -1.75
COPB1P53618 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COPB1P53618 RNU6-853P-201ENST00000364306 107 ntBASIC4.13□□□□□ -1.75
COPB1P53618 Y_RNA.256-201ENST00000364594 104 ntBASIC4.13□□□□□ -1.75
COPB1P53618 RNA5SP97-201ENST00000365006 84 ntBASIC4.13□□□□□ -1.75
COPB1P53618 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.13□□□□□ -1.75
COPB1P53618 RNU6-1103P-201ENST00000384150 107 ntBASIC4.13□□□□□ -1.75
COPB1P53618 RNU1-13P-201ENST00000384499 162 ntBASIC4.13□□□□□ -1.75
COPB1P53618 MTCO3P40-201ENST00000392516 676 ntBASIC4.13□□□□□ -1.75
COPB1P53618 CALM2P3-201ENST00000400429 449 ntBASIC4.13□□□□□ -1.75
COPB1P53618 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.13□□□□□ -1.75
COPB1P53618 FCF1P10-201ENST00000407590 479 ntBASIC4.13□□□□□ -1.75
COPB1P53618 MIR1183-201ENST00000408856 89 ntBASIC4.13□□□□□ -1.75
COPB1P53618 RPS15AP40-201ENST00000419621 391 ntBASIC4.13□□□□□ -1.75
COPB1P53618 PIGFP2-201ENST00000421400 651 ntBASIC4.13□□□□□ -1.75
COPB1P53618 RPL7P2-201ENST00000427639 268 ntBASIC4.13□□□□□ -1.75
COPB1P53618 ISCA1P6-201ENST00000427740 390 ntBASIC4.13□□□□□ -1.75
COPB1P53618 AC000111.3-201ENST00000433478 193 ntBASIC4.13□□□□□ -1.75
COPB1P53618 NDUFB1P1-201ENST00000435191 180 ntBASIC4.13□□□□□ -1.75
COPB1P53618 AL451074.3-201ENST00000437709 472 ntBASIC4.13□□□□□ -1.75
COPB1P53618 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.13□□□□□ -1.75
COPB1P53618 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.13□□□□□ -1.75
COPB1P53618 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.13□□□□□ -1.75
COPB1P53618 SNORA84-201ENST00000459229 133 ntBASIC4.13□□□□□ -1.75
COPB1P53618 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.13□□□□□ -1.75
COPB1P53618 AC087385.1-201ENST00000475062 312 ntBASIC4.13□□□□□ -1.75
COPB1P53618 AC019235.1-201ENST00000503847 207 ntBASIC4.13□□□□□ -1.75
COPB1P53618 Y_RNA.672-201ENST00000516289 104 ntBASIC4.13□□□□□ -1.75
COPB1P53618 AC022695.1-201ENST00000522089 237 ntBASIC4.13□□□□□ -1.75
COPB1P53618 AC008489.1-201ENST00000524271 483 ntBASIC4.13□□□□□ -1.75
COPB1P53618 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COPB1P53618 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
COPB1P53618 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.13□□□□□ -1.75
COPB1P53618 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.13□□□□□ -1.75
COPB1P53618 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.13□□□□□ -1.75
COPB1P53618 AC007424.1-203ENST00000554613 687 ntBASIC4.13□□□□□ -1.75
COPB1P53618 MTCO3P24-201ENST00000572729 782 ntBASIC4.13□□□□□ -1.75
COPB1P53618 MIR4512-201ENST00000583257 77 ntBASIC4.13□□□□□ -1.75
COPB1P53618 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.13□□□□□ -1.75
COPB1P53618 NRBF2P1-201ENST00000587407 859 ntBASIC4.13□□□□□ -1.75
COPB1P53618 DUXAP4-201ENST00000603046 613 ntBASIC4.13□□□□□ -1.75
COPB1P53618 AL592436.1-201ENST00000605135 558 ntBASIC4.13□□□□□ -1.75
COPB1P53618 AC009159.1-201ENST00000618386 642 ntBASIC4.13□□□□□ -1.75
COPB1P53618 U6.42-201ENST00000618440 107 ntBASIC4.13□□□□□ -1.75
COPB1P53618 AL359880.1-201ENST00000621879 266 ntBASIC4.13□□□□□ -1.75
COPB1P53618 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.13□□□□□ -1.75
COPB1P53618 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.13□□□□□ -1.75
COPB1P53618 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
COPB1P53618 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
COPB1P53618 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.12□□□□□ -1.75
COPB1P53618 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COPB1P53618 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.12□□□□□ -1.75
COPB1P53618 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
COPB1P53618 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.12□□□□□ -1.75
COPB1P53618 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
COPB1P53618 MIR423-201ENST00000362201 94 ntBASIC4.12□□□□□ -1.75
COPB1P53618 RNU6-283P-201ENST00000364788 107 ntBASIC4.12□□□□□ -1.75
COPB1P53618 RNU4-12P-201ENST00000365233 139 ntBASIC4.12□□□□□ -1.75
COPB1P53618 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
COPB1P53618 Y_RNA.390-201ENST00000383932 102 ntBASIC4.12□□□□□ -1.75
COPB1P53618 SOD2P1-201ENST00000396543 562 ntBASIC4.12□□□□□ -1.75
COPB1P53618 RNA5SP239-201ENST00000410218 129 ntBASIC4.12□□□□□ -1.75
COPB1P53618 RN7SKP202-201ENST00000410439 330 ntBASIC4.12□□□□□ -1.75
COPB1P53618 AC002075.2-201ENST00000425207 252 ntBASIC4.12□□□□□ -1.75
COPB1P53618 AL353777.1-201ENST00000425552 326 ntBASIC4.12□□□□□ -1.75
COPB1P53618 EZH2P1-201ENST00000431167 291 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms