Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL355578.1-201ENST00000607405 1328 ntBASIC2.28□□□□□ -2.04
NUP98P52948 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.28□□□□□ -2.04
NUP98P52948 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.28□□□□□ -2.04
NUP98P52948 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.28□□□□□ -2.04
NUP98P52948 AL358453.1-201ENST00000422522 250 ntBASIC2.28□□□□□ -2.04
NUP98P52948 PSMA2P3-201ENST00000429685 675 ntBASIC2.28□□□□□ -2.04
NUP98P52948 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.28□□□□□ -2.04
NUP98P52948 NF1P3-201ENST00000457709 450 ntBASIC2.28□□□□□ -2.04
NUP98P52948 AC110792.2-201ENST00000510278 224 ntBASIC2.28□□□□□ -2.04
NUP98P52948 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.28□□□□□ -2.04
NUP98P52948 SCARNA17.1-201ENST00000516211 143 ntBASIC2.28□□□□□ -2.04
NUP98P52948 SCARNA17.2-201ENST00000516334 143 ntBASIC2.28□□□□□ -2.04
NUP98P52948 POLR2KP1-201ENST00000553226 168 ntBASIC2.28□□□□□ -2.04
NUP98P52948 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NUP98P52948 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.28□□□□□ -2.04
NUP98P52948 AC010678.1-201ENST00000614118 713 ntBASIC2.28□□□□□ -2.04
NUP98P52948 SCARNA17.4-201ENST00000614296 143 ntBASIC2.28□□□□□ -2.04
NUP98P52948 AL353748.2-201ENST00000622148 471 ntBASIC2.28□□□□□ -2.04
NUP98P52948 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
NUP98P52948 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
NUP98P52948 RNA5SP391-201ENST00000363456 119 ntBASIC2.27□□□□□ -2.05
NUP98P52948 RNA5SP138-201ENST00000365098 114 ntBASIC2.27□□□□□ -2.05
NUP98P52948 U8.10-201ENST00000384260 133 ntBASIC2.27□□□□□ -2.05
NUP98P52948 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NUP98P52948 RPL21P66-201ENST00000426566 466 ntBASIC2.27□□□□□ -2.05
NUP98P52948 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.27□□□□□ -2.05
NUP98P52948 AL590664.1-201ENST00000448065 339 ntBASIC2.27□□□□□ -2.05
NUP98P52948 AC087190.1-201ENST00000484462 480 ntBASIC2.27□□□□□ -2.05
NUP98P52948 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.27□□□□□ -2.05
NUP98P52948 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.27□□□□□ -2.05
NUP98P52948 AL133393.1-201ENST00000603277 287 ntBASIC2.27□□□□□ -2.05
NUP98P52948 AC091046.2-201ENST00000620775 665 ntBASIC2.27□□□□□ -2.05
NUP98P52948 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.27□□□□□ -2.05
NUP98P52948 AP000553.5-201ENST00000641933 54 ntBASIC2.27□□□□□ -2.05
NUP98P52948 AC019129.1-201ENST00000403786 261 ntBASIC2.26□□□□□ -2.05
NUP98P52948 RNU2-21P-201ENST00000410368 188 ntBASIC2.26□□□□□ -2.05
NUP98P52948 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.26□□□□□ -2.05
NUP98P52948 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.26□□□□□ -2.05
NUP98P52948 AL392003.1-201ENST00000434394 243 ntBASIC2.26□□□□□ -2.05
NUP98P52948 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.26□□□□□ -2.05
NUP98P52948 snoU13.7-201ENST00000459220 104 ntBASIC2.26□□□□□ -2.05
NUP98P52948 AC010301.1-201ENST00000473936 355 ntBASIC2.26□□□□□ -2.05
NUP98P52948 AC011352.3-201ENST00000505162 593 ntBASIC2.26□□□□□ -2.05
NUP98P52948 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
NUP98P52948 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.26□□□□□ -2.05
NUP98P52948 DNAJC19P9-201ENST00000555084 351 ntBASIC2.26□□□□□ -2.05
NUP98P52948 AL049870.4-201ENST00000555741 486 ntBASIC2.26□□□□□ -2.05
NUP98P52948 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.26□□□□□ -2.05
NUP98P52948 HMGB1P51-201ENST00000605166 638 ntBASIC2.26□□□□□ -2.05
NUP98P52948 KPNA2P1-201ENST00000458289 1591 ntBASIC2.26□□□□□ -2.05
NUP98P52948 AC012321.1-201ENST00000561622 1588 ntBASIC2.26□□□□□ -2.05
NUP98P52948 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.26□□□□□ -2.05
NUP98P52948 RNU4-65P-201ENST00000410473 140 ntBASIC2.26□□□□□ -2.05
NUP98P52948 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.26□□□□□ -2.05
NUP98P52948 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.26□□□□□ -2.05
NUP98P52948 RPS27P5-201ENST00000444247 244 ntBASIC2.26□□□□□ -2.05
NUP98P52948 AL627224.1-201ENST00000448334 444 ntBASIC2.26□□□□□ -2.05
NUP98P52948 AC089999.1-201ENST00000460336 374 ntBASIC2.26□□□□□ -2.05
NUP98P52948 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
NUP98P52948 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.26□□□□□ -2.05
NUP98P52948 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.26□□□□□ -2.05
NUP98P52948 OR4T1P-201ENST00000554933 911 ntBASIC2.26□□□□□ -2.05
NUP98P52948 AC090751.1-201ENST00000566966 267 ntBASIC2.26□□□□□ -2.05
NUP98P52948 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.26□□□□□ -2.05
NUP98P52948 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.26□□□□□ -2.05
NUP98P52948 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.26□□□□□ -2.05
NUP98P52948 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.26□□□□□ -2.05
NUP98P52948 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NUP98P52948 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
NUP98P52948 AL049737.1-201ENST00000413920 1403 ntBASIC2.25□□□□□ -2.05
NUP98P52948 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
NUP98P52948 AL021407.1-201ENST00000404531 386 ntBASIC2.25□□□□□ -2.05
NUP98P52948 MIR1250-201ENST00000408098 113 ntBASIC2.25□□□□□ -2.05
NUP98P52948 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.25□□□□□ -2.05
NUP98P52948 OR4K11P-201ENST00000431829 904 ntBASIC2.25□□□□□ -2.05
NUP98P52948 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.25□□□□□ -2.05
NUP98P52948 AC093392.2-201ENST00000450682 337 ntBASIC2.25□□□□□ -2.05
NUP98P52948 SSXP4-201ENST00000451349 245 ntBASIC2.25□□□□□ -2.05
NUP98P52948 HMGN2P16-201ENST00000456802 261 ntBASIC2.25□□□□□ -2.05
NUP98P52948 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.25□□□□□ -2.05
NUP98P52948 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.25□□□□□ -2.05
NUP98P52948 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NUP98P52948 AC117525.1-201ENST00000515228 503 ntBASIC2.25□□□□□ -2.05
NUP98P52948 snoZ278.1-201ENST00000517059 112 ntBASIC2.25□□□□□ -2.05
NUP98P52948 AC090695.1-201ENST00000561269 1222 ntBASIC2.25□□□□□ -2.05
NUP98P52948 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.25□□□□□ -2.05
NUP98P52948 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.25□□□□□ -2.05
NUP98P52948 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.25□□□□□ -2.05
NUP98P52948 AL121917.1-203ENST00000605534 577 ntBASIC2.25□□□□□ -2.05
NUP98P52948 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NUP98P52948 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
NUP98P52948 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.24□□□□□ -2.05
NUP98P52948 RNU6-50P-201ENST00000362356 103 ntBASIC2.24□□□□□ -2.05
NUP98P52948 RNU2-17P-201ENST00000410290 190 ntBASIC2.24□□□□□ -2.05
NUP98P52948 RPS7P2-201ENST00000435134 607 ntBASIC2.24□□□□□ -2.05
NUP98P52948 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.24□□□□□ -2.05
NUP98P52948 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.24□□□□□ -2.05
NUP98P52948 VN1R80P-201ENST00000597126 338 ntBASIC2.24□□□□□ -2.05
NUP98P52948 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.24□□□□□ -2.05
NUP98P52948 AC024560.3-201ENST00000608482 349 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms