Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 USP9YP14-201ENST00000430663 563 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCNKAP51800 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLCNKAP51800 RPS24P1-201ENST00000438550 371 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCNKAP51800 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCNKAP51800 USP9YP12-201ENST00000450481 570 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 SSXP1-201ENST00000453640 473 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 RNU7-170P-201ENST00000459303 61 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCNKAP51800 ARL2BPP4-201ENST00000506854 471 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 TXNP6-201ENST00000510190 310 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 AC026403.1-201ENST00000518938 295 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCNKAP51800 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.65□□□□□ -1.83
CLCNKAP51800 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCNKAP51800 MTND1P15-201ENST00000579262 949 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.65□□□□□ -1.83
CLCNKAP51800 AL669831.4-202ENST00000590817 238 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 AC087683.1-201ENST00000591187 441 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.65□□□□□ -1.83
CLCNKAP51800 AC078795.2-201ENST00000602835 1252 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 AC015871.2-201ENST00000603605 948 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 SEPT7P9-203ENST00000604116 343 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 AC104073.3-201ENST00000610942 955 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 AL391261.4-201ENST00000616012 481 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.65□□□□□ -1.83
CLCNKAP51800 AC099842.1-201ENST00000619919 596 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLCNKAP51800 ZNF285B-201ENST00000561698 1767 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.65□□□□□ -1.83
CLCNKAP51800 TEX21P-201ENST00000447107 1476 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLCNKAP51800 CCT4P2-201ENST00000233836 1548 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.64□□□□□ -1.83
CLCNKAP51800 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.64□□□□□ -1.83
CLCNKAP51800 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CLCNKAP51800 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLCNKAP51800 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.64□□□□□ -1.83
CLCNKAP51800 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CLCNKAP51800 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLCNKAP51800 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCNKAP51800 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CLCNKAP51800 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCNKAP51800 AL161781.1-201ENST00000354277 403 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 RNU1-18P-201ENST00000363062 164 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 SNORA73.2-201ENST00000364946 201 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 AL359837.1-201ENST00000381357 287 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 RNU6-348P-201ENST00000384386 107 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 Y_RNA.548-201ENST00000384656 105 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 RPL7P60-201ENST00000397636 735 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 RNA5SP56-201ENST00000410277 118 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.64□□□□□ -1.83
CLCNKAP51800 ATP5A1P2-201ENST00000412323 255 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 HMGN1P14-201ENST00000412459 517 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 AL035423.1-201ENST00000420331 213 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.64□□□□□ -1.83
CLCNKAP51800 AL159169.1-201ENST00000421119 127 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCNKAP51800 RPL21P66-201ENST00000426566 466 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.64□□□□□ -1.83
CLCNKAP51800 GOT2P5-201ENST00000433995 546 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.64□□□□□ -1.83
CLCNKAP51800 AL031667.1-201ENST00000440222 725 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 FAM103A2P-201ENST00000444122 354 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.64□□□□□ -1.83
CLCNKAP51800 AL590365.1-201ENST00000450788 243 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCNKAP51800 Z82190.1-201ENST00000454534 490 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.64□□□□□ -1.83
CLCNKAP51800 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCNKAP51800 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.64□□□□□ -1.83
CLCNKAP51800 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCNKAP51800 BTF3L4P4-201ENST00000506381 449 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 AC010625.1-201ENST00000511296 403 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCNKAP51800 RANP9-201ENST00000519957 271 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.64□□□□□ -1.83
CLCNKAP51800 OR4P1P-201ENST00000530808 1136 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.64□□□□□ -1.83
CLCNKAP51800 AP002453.2-201ENST00000533503 320 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.64□□□□□ -1.83
CLCNKAP51800 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 AC107954.1-201ENST00000565906 727 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.64□□□□□ -1.83
CLCNKAP51800 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.64□□□□□ -1.83
CLCNKAP51800 AC013562.2-201ENST00000611632 603 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLCNKAP51800 AL596245.1-201ENST00000618994 362 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 AL603839.4-201ENST00000624658 1005 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 AC244205.2-202ENST00000635781 342 ntBASIC3.64□□□□□ -1.83
CLCNKAP51800 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.64□□□□□ -1.83
CLCNKAP51800 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLCNKAP51800 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCNKAP51800 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCNKAP51800 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCNKAP51800 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms